Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TXNP2-201ENST00000443918 295 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CISHQ9NSE2 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 DEFB109F-201ENST00000491870 277 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CISHQ9NSE2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CISHQ9NSE2 RPL23AP97-201ENST00000568955 471 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 BNIP3P41-202ENST00000616656 861 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 MFSD8-242ENST00000641690 4199 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC139713.2-214ENST00000642059 1811 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 OR5P1P-201ENST00000299512 925 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 ELOCP19-201ENST00000411919 318 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC068287.1-201ENST00000430283 295 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC013356.1-201ENST00000489027 564 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 RPS27AP16-201ENST00000492222 470 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 ATP1B1P1-201ENST00000509767 915 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC015795.1-201ENST00000513669 327 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 RNA5SP464-201ENST00000516251 108 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC020937.1-201ENST00000519677 1013 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC068993.1-201ENST00000546724 589 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 GSTP1P1-201ENST00000548078 319 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 MIR5096-201ENST00000583713 70 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 SLC25A36P1-201ENST00000590111 465 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 AC090948.1-201ENST00000607464 549 ntBASIC4.7□□□□□ -1.66
CISHQ9NSE2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CISHQ9NSE2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CISHQ9NSE2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 RPA2P2-201ENST00000419698 796 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC004448.2-201ENST00000422360 586 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 FTLP19-201ENST00000433300 394 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 ARL4AP3-201ENST00000441452 574 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 RPS4XP12-201ENST00000461747 709 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC012158.1-204ENST00000483430 465 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AC005191.1-201ENST00000603950 358 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.69□□□□□ -1.66
CISHQ9NSE2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 AL513548.1-201ENST00000562904 1724 ntBASIC4.69□□□□□ -1.66
CISHQ9NSE2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CISHQ9NSE2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AC006971.1-201ENST00000407916 4486 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CISHQ9NSE2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 MIR331-201ENST00000362302 94 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 RN7SKP74-201ENST00000362849 309 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 RNA5SP22-201ENST00000365393 109 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.68□□□□□ -1.66
CISHQ9NSE2 AL732292.1-201ENST00000426692 226 ntBASIC4.68□□□□□ -1.66
CISHQ9NSE2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms