Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC026951.1-201ENST00000559530 2459 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC126755.2-208ENST00000327792 462 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC138969.1-213ENST00000331436 462 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 SNORA62-201ENST00000365493 153 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AL359265.2-201ENST00000434367 631 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 TPT1P12-201ENST00000448968 492 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 RN7SKP276-201ENST00000516242 268 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC068446.3-201ENST00000555285 382 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC068714.1-201ENST00000559623 800 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC018552.3-201ENST00000567416 561 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AC087821.1-201ENST00000623639 567 ntBASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.91□□□□□ -1.62
TM9SF3Q9HD45 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.62
TM9SF3Q9HD45 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 RNU6-1251P-201ENST00000364502 107 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 RNA5SP332-201ENST00000391063 115 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC009480.2-201ENST00000422916 432 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC092447.2-201ENST00000435487 669 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 RPL35AP21-201ENST00000437667 333 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AL031584.1-201ENST00000447169 754 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC010733.1-201ENST00000451515 401 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC234781.3-201ENST00000452540 973 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 RPL23AP56-201ENST00000460778 453 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC010326.1-201ENST00000462726 602 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 PRELID3BP5-201ENST00000508612 460 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC105031.1-201ENST00000518550 476 ntBASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.9□□□□□ -1.63
TM9SF3Q9HD45 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms