Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC234782.4-201ENST00000417646 1048 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC002069.1-201ENST00000429649 1159 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 BX679664.2-201ENST00000439282 283 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL138878.2-201ENST00000440581 1241 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 RPL7P59-201ENST00000447700 943 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 RPL23AP35-201ENST00000451906 501 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 RPL37P3-201ENST00000456825 293 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 RN7SL269P-201ENST00000467795 305 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 NDUFA5P5-201ENST00000468361 342 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ARL4AP1-201ENST00000503220 705 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 MTCO1P30-201ENST00000515244 580 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 SCARNA18.1-201ENST00000516330 83 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 HIGD1AP6-201ENST00000521833 279 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC018442.3-201ENST00000523025 183 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC007115.1-201ENST00000546853 234 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC004217.3-201ENST00000551552 878 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC007342.5-201ENST00000571340 2142 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC012213.3-201ENST00000577199 777 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC067773.1-201ENST00000603284 1094 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL137072.1-201ENST00000603444 466 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC018714.1-201ENST00000605028 208 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC006270.3-201ENST00000605967 1036 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 MIR6793-201ENST00000612376 63 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC008121.2-201ENST00000614647 523 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC008083.4-201ENST00000615076 444 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC234782.5-201ENST00000617723 324 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ZNF833P-201ENST00000424938 1494 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 BRAFP1-201ENST00000445336 2703 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 AL731532.1-201ENST00000623972 4236 ntBASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
TRIM39Q9HCM9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 SUGT1P2-201ENST00000379452 992 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 SNRPEP6-201ENST00000407465 277 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 MYL6P5-201ENST00000412707 459 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 NMD3P2-201ENST00000421815 761 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AL513175.1-201ENST00000431492 780 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 RPS25P9-201ENST00000435591 252 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AP000936.3-201ENST00000438127 255 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 ELOCP30-201ENST00000447108 299 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AL591363.1-201ENST00000450091 483 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AC124945.1-201ENST00000485133 188 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 RN7SL193P-201ENST00000491708 276 ntBASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM39Q9HCM9 AC008945.1-201ENST00000505144 499 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms