Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 MIR183-201ENST00000384958 110 ntBASIC4.26□□□□□ -1.73
CHD8Q9HCK8 LINC00993-201ENST00000420453 540 ntBASIC4.26□□□□□ -1.73
CHD8Q9HCK8 MRPL50P1-201ENST00000431951 384 ntBASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AL157394.1-201ENST00000562983 1224 ntBASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 U3.53-201ENST00000628922 216 ntBASIC4.26□□□□□ -1.73
CHD8Q9HCK8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC4.26□□□□□ -1.73
CHD8Q9HCK8 AC008758.3-201ENST00000507003 1829 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 MTND4LP20-201ENST00000402379 270 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 TRAV8-5-201ENST00000537369 341 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 RNU4-89P-201ENST00000607443 133 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC243960.7-201ENST00000623532 707 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 U3.32-201ENST00000408116 212 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 RN7SKP16-201ENST00000410180 299 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 OOSP1P1-201ENST00000423265 274 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 SLC25A51P1-201ENST00000468432 871 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC139783.2-201ENST00000504847 1145 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AL713922.2-201ENST00000619384 716 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AP001885.1-201ENST00000621658 558 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 AC023632.6-201ENST00000624338 2177 ntBASIC4.25□□□□□ -1.73
CHD8Q9HCK8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.25□□□□□ -1.73
CHD8Q9HCK8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 SNORA5A-201ENST00000384111 134 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 RNA5SP247-201ENST00000411181 105 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AL450023.3-201ENST00000440592 271 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 RPS4XP15-201ENST00000489210 795 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC005412.2-201ENST00000492004 341 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 SNORA74C-1-201ENST00000580726 201 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 MTCO3P22-201ENST00000603219 784 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC093591.2-201ENST00000565254 3843 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 BRD7P6-201ENST00000431406 1860 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 SNRPFP1-201ENST00000414761 252 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 DNAJC19P8-201ENST00000452887 259 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC016559.2-201ENST00000510759 359 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC006504.3-201ENST00000586818 523 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AL031985.2-201ENST00000600955 480 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AC110801.1-201ENST00000623590 212 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 AL449283.1-201ENST00000602631 3403 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 VN2R3P-201ENST00000422626 1412 ntBASIC4.24□□□□□ -1.73
CHD8Q9HCK8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD8Q9HCK8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 RN7SKP153-201ENST00000365026 316 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL035696.2-201ENST00000407941 709 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms