Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SKP149-201ENST00000363008 344 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL807761.1-201ENST00000417622 171 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 USP9YP9-201ENST00000429406 715 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 RPL7P34-201ENST00000433316 712 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 ARL5AP3-201ENST00000439327 386 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 KNOP1P3-201ENST00000446933 426 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 TPTE2P5-203ENST00000458118 728 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC104982.1-201ENST00000478775 574 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC090543.1-201ENST00000492168 485 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC140172.1-201ENST00000502928 141 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 IGBP1P4-201ENST00000503202 879 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC020699.1-201ENST00000505161 445 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 BTF3P13-201ENST00000513224 490 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC006427.1-201ENST00000514359 712 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL671862.1-201ENST00000515851 349 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC104115.2-201ENST00000523026 687 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC021006.3-201ENST00000530771 192 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC234772.3-201ENST00000602277 528 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC108738.1-201ENST00000603703 237 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL031320.1-201ENST00000604177 357 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 uc_338.18-201ENST00000615451 175 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC007275.1-201ENST00000621243 671 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC068880.4-201ENST00000623082 495 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 AC012618.3-205ENST00000637896 1496 ntBASIC5.31□□□□□ -1.56
EBF3Q9H4W6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EBF3Q9H4W6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC132825.1-201ENST00000463573 2247 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 RNA5SP428-201ENST00000365129 132 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 TRIM60P17-201ENST00000415181 719 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 ARAFP1-201ENST00000422172 605 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 MGAT2P2-201ENST00000427194 797 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 TXNL1P1-201ENST00000429528 554 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AL513321.1-201ENST00000441175 761 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 RPS4XP12-201ENST00000461747 709 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 COX6B1P5-201ENST00000509843 249 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC103833.1-201ENST00000517442 172 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 OR7E128P-201ENST00000532736 1024 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 NPM1P35-201ENST00000533043 868 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC027369.5-201ENST00000533838 755 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC009117.1-201ENST00000563948 554 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC069431.2-201ENST00000604149 1099 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 MEMO1P5-201ENST00000604810 406 ntBASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.3□□□□□ -1.56
EBF3Q9H4W6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms