Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 DDX18P4-201ENST00000511690 1966 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 RN7SKP185-201ENST00000362813 326 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 SNORA62-201ENST00000365493 153 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 U6.112-201ENST00000384129 70 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC021876.1-201ENST00000425959 359 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 C4BPAP2-201ENST00000428434 478 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL359265.2-201ENST00000434367 631 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL161722.2-201ENST00000434731 981 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL358794.1-201ENST00000445689 381 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL031313.1-201ENST00000448435 256 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MRPS33P2-201ENST00000507850 322 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL049838.1-201ENST00000563647 981 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 ATP5F1P7-201ENST00000567330 760 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MIR3667-201ENST00000581025 74 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MIR5096-201ENST00000583713 70 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC083809.1-201ENST00000615051 472 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC074140.1-201ENST00000621617 208 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AC012414.7-202ENST00000622705 1090 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 AP001284.1-201ENST00000528393 2118 ntBASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RTFDC1Q9BY42 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.27□□□□□ -1.4
RTFDC1Q9BY42 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.27□□□□□ -1.4
RTFDC1Q9BY42 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 RNU5B-1-201ENST00000363286 116 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SNORA66-201ENST00000384792 133 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 TCEA1P4-201ENST00000415066 844 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 OR13Z1P-201ENST00000416141 834 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 COX6CP17-201ENST00000421389 185 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 FTH1P16-201ENST00000435241 552 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 RRM2P4-201ENST00000441721 562 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 OR7E125P-201ENST00000443450 846 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 NOP56P2-201ENST00000447491 769 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 RN7SL385P-201ENST00000468873 276 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 NDUFA5P9-201ENST00000472609 340 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 GLUD1P3-202ENST00000508551 200 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 MTND2P32-201ENST00000521584 1038 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 NMNAT1P1-201ENST00000554095 876 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC013244.3-201ENST00000605614 388 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC063944.3-201ENST00000609969 533 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC096586.1-201ENST00000610267 561 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AC073869.7-201ENST00000640874 297 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 AL355834.1-201ENST00000556602 3965 ntBASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RTFDC1Q9BY42 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RTFDC1Q9BY42 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms