Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AP000859.1-201ENST00000525536 307 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 ATP5F1P7-201ENST00000567330 760 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC022884.2-201ENST00000578535 580 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 PIGPP4-201ENST00000584447 307 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 VN1R83P-201ENST00000595685 445 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AL109653.1-201ENST00000603091 248 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC011626.1-201ENST00000604710 562 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC100767.2-201ENST00000604840 693 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AL096712.1-201ENST00000614561 159 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC131159.1-201ENST00000621854 213 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 CU639417.4-201ENST00000623928 207 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 OR1S1-201ENST00000624470 978 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC004817.4-201ENST00000602396 3625 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AC011755.1-201ENST00000623763 2049 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PACSIN1Q9BY11 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC104454.1-201ENST00000421341 1401 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 OR9K1P-202ENST00000641111 3217 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 METTL21EP-201ENST00000298105 713 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RNU1-19P-201ENST00000363306 165 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RNU6-83P-201ENST00000384568 112 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RPS27AP11-201ENST00000402798 447 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 BMS1P17-202ENST00000416720 316 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RPS3P2-201ENST00000421346 701 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RPL23AP4-201ENST00000427757 463 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 VN1R108P-201ENST00000431580 830 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RPL12P17-201ENST00000432393 498 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RPL34P26-201ENST00000445636 354 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 EXTL2P1-201ENST00000446218 416 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AL672138.1-201ENST00000450604 1015 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 ATG12P2-201ENST00000456830 416 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC093890.1-201ENST00000502554 540 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC138938.1-201ENST00000515431 782 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 SCARNA16.4-201ENST00000516956 187 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC138832.1-201ENST00000522871 556 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AL049872.1-201ENST00000556323 322 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC107958.1-201ENST00000556576 290 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC010620.1-201ENST00000601088 1102 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AL392112.1-201ENST00000605115 829 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AL360219.1-201ENST00000610230 366 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC009318.3-201ENST00000616916 503 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC109583.2-201ENST00000617367 129 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 AC093849.1-201ENST00000563631 2209 ntBASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PACSIN1Q9BY11 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 AC107021.2-201ENST00000567714 2095 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 MIR133B-201ENST00000362210 119 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 RNU4-2-201ENST00000365668 141 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 RNU6-729P-201ENST00000384399 107 ntBASIC5.65□□□□□ -1.5
PACSIN1Q9BY11 RNU6-452P-201ENST00000384406 107 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms