Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 HMGB2P1-201ENST00000591146 634 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC005972.3-201ENST00000606304 481 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC119674.1-220ENST00000641502 1048 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 CASC19-264ENST00000641912 1184 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 MTND4P21-201ENST00000453886 1357 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 CR382285.2-201ENST00000624662 1495 ntBASIC4.62□□□□□ -1.67
CCDC28BQ9BUN5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC098592.2-201ENST00000413158 265 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 CDY17P-201ENST00000414121 1282 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 RAC1P3-201ENST00000416129 580 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 LINC00993-201ENST00000420453 540 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 ZFAND6P1-201ENST00000434138 605 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 MTCO3P43-201ENST00000440974 771 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 SPRYD7P1-201ENST00000443861 570 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 RPS15AP29-201ENST00000445539 400 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 RNU6-760P-201ENST00000516078 97 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 BUD31P1-201ENST00000521828 359 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 PDCD5P1-201ENST00000543528 309 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC027281.1-201ENST00000574178 758 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AL627230.1-201ENST00000613077 211 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AL591926.8-201ENST00000616876 211 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC126175.1-201ENST00000617041 758 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AP002967.1-201ENST00000624203 539 ntBASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC28BQ9BUN5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC107021.2-201ENST00000567714 2095 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 THAP12P4-201ENST00000528321 2266 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 OR1F12-201ENST00000402365 945 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 OR52B5P-201ENST00000435337 951 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RAB9AP5-201ENST00000437794 597 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RAB9AP2-201ENST00000443911 597 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 MORF4L1P4-201ENST00000450245 976 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC015795.1-201ENST00000513669 327 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 HNRNPKP5-201ENST00000515300 253 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RNA5SP446-201ENST00000515955 82 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RN7SKP70-201ENST00000516655 271 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 MTCYBP19-201ENST00000517463 1124 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 IGHV3-63-201ENST00000518422 341 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC027455.1-201ENST00000574104 594 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 AC103858.2-201ENST00000621471 543 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 CR381572.2-201ENST00000624852 397 ntBASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC28BQ9BUN5 OR52B5P-202ENST00000641118 1110 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms