Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.01□□□□□ -1.29
USB1Q9BQ65 AL442128.2-201ENST00000620246 1824 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.01□□□□□ -1.29
USB1Q9BQ65 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
USB1Q9BQ65 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 Y_RNA.212-201ENST00000364177 102 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 U3.14-201ENST00000365363 227 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 Y_RNA.447-201ENST00000384184 113 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 AC008280.1-201ENST00000418851 412 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC093155.2-201ENST00000420734 937 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 GAPDHP57-201ENST00000424400 585 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 MTATP6P16-201ENST00000434543 526 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 ZDHHC20P1-204ENST00000435787 423 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC114495.1-201ENST00000441274 436 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 MTND1P17-201ENST00000448961 204 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AC092451.1-201ENST00000480211 153 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AC093267.1-201ENST00000489176 961 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 TXNP6-201ENST00000510190 310 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 CYP4A44P-201ENST00000569984 154 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC138761.3-201ENST00000579993 334 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 MIR4642-201ENST00000583943 82 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 uc_338.12-201ENST00000616344 181 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 AL450226.2-201ENST00000622913 439 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 ZNF658B-201ENST00000602828 3408 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 Z99129.4-201ENST00000624649 2435 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7□□□□□ -1.29
USB1Q9BQ65 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 FER-202ENST00000438717 1531 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 NLRP3P1-201ENST00000622303 1785 ntBASIC7□□□□□ -1.29
USB1Q9BQ65 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7□□□□□ -1.29
USB1Q9BQ65 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
USB1Q9BQ65 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7□□□□□ -1.29
USB1Q9BQ65 AC104083.1-201ENST00000569449 2615 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL590065.1-201ENST00000603371 4774 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL157777.2-201ENST00000258070 137 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms