Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL592291.1-201ENST00000403830 352 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 MIR6867-201ENST00000610636 67 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 MIR8069-1-201ENST00000616627 86 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AC022106.2-201ENST00000620114 757 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 MIR8069-2-201ENST00000621412 86 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 TCP11X1-202ENST00000622971 1372 ntBASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP2Q96SN8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 RNU1-83P-201ENST00000363426 164 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 CDY14P-201ENST00000431260 1014 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 CDY12P-201ENST00000440679 1015 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 CDY13P-201ENST00000445813 1015 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 CDY23P-201ENST00000451661 1014 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AC100871.1-201ENST00000507871 1456 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 NPM1P21-201ENST00000513394 762 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 NPM1P6-201ENST00000521088 871 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL139254.3-201ENST00000641097 674 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 LINC01808-202ENST00000641680 1116 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 MFSD8-220ENST00000641243 1422 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 FCF1P5-201ENST00000406490 482 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 EIF4A1P3-201ENST00000411521 244 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 MFSD13B-201ENST00000420133 1290 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 UBE2V1P3-201ENST00000439651 417 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AC091979.2-201ENST00000607514 214 ntBASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDK5RAP2Q96SN8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AP001002.1-201ENST00000625148 1513 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 NXPH1-205ENST00000602349 1953 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 ARAFP1-201ENST00000422172 605 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 REREP1Y-201ENST00000422655 198 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 SETP9-201ENST00000423837 832 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 REREP2Y-201ENST00000439103 200 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 RNA5SP246-201ENST00000458909 119 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 RN7SL604P-201ENST00000492589 296 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 TPT1P3-201ENST00000492841 512 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 RPL23AP97-201ENST00000568955 471 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 MIR4433B-201ENST00000581329 102 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AL445363.3-201ENST00000623080 671 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 AL603750.1-201ENST00000624216 1717 ntBASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP2Q96SN8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP2Q96SN8 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms