Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL359715.5-201ENST00000623431 443 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 CASC19-264ENST00000641912 1184 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 MAPK10-263ENST00000641052 4307 ntBASIC3.47□□□□□ -1.85
AP1S3Q96PC3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.47□□□□□ -1.85
AP1S3Q96PC3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
AP1S3Q96PC3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 CYP1D1P-201ENST00000416662 1433 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 MIR143-201ENST00000385300 106 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 JKAMPP1-201ENST00000413804 919 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AF186996.5-201ENST00000418098 904 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 ELOCP18-201ENST00000434209 337 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 IFNWP4-201ENST00000453148 294 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 FABP3P2-201ENST00000453169 399 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC025164.1-201ENST00000496249 478 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC107016.1-201ENST00000550463 337 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 MIR5010-201ENST00000582846 120 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC008759.1-201ENST00000589783 983 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC010424.2-201ENST00000607594 443 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC017076.1-201ENST00000607613 578 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AL135786.2-201ENST00000608422 615 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC126175.1-201ENST00000617041 758 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AL359742.1-201ENST00000622497 540 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AP002505.2-201ENST00000623585 696 ntBASIC3.46□□□□□ -1.86
AP1S3Q96PC3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
AP1S3Q96PC3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 HSPD1P14-201ENST00000432666 1618 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AL133412.1-201ENST00000380194 2992 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 MIR3074-201ENST00000384885 81 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RNA5SP345-201ENST00000410646 108 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RNA5SP39-201ENST00000411245 120 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 DPPA2P3-201ENST00000411853 655 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 VN1R3-201ENST00000418822 919 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC092647.1-201ENST00000420654 287 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 SLC25A18P1-201ENST00000449385 454 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RN7SL319P-201ENST00000480656 221 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC108693.1-201ENST00000496068 432 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC139783.2-201ENST00000504847 1145 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 IFITM8P-201ENST00000522529 394 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AL352979.3-201ENST00000553515 247 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC008966.2-201ENST00000606157 453 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 OR7A19P-201ENST00000608051 733 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AC126915.2-201ENST00000610957 190 ntBASIC3.45□□□□□ -1.86
AP1S3Q96PC3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
AP1S3Q96PC3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms