Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 Z69908.1-201ENST00000622603 247 ntBASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 AC135068.5-201ENST00000624197 983 ntBASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 AL034546.1-201ENST00000623740 3693 ntBASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 NAMPTP1-201ENST00000440465 2514 ntBASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHAMP1Q96JM3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL450345.1-202ENST00000605741 3881 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 RNA5SP27-201ENST00000363839 119 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 RNU6-304P-201ENST00000364855 107 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SUGT1P2-201ENST00000379452 992 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SNORA16A-201ENST00000384342 137 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 RPL23AP59-201ENST00000399415 461 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 Y_RNA.619-201ENST00000410951 90 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL355433.1-201ENST00000422804 300 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC234781.2-201ENST00000426370 994 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 RPL7P56-201ENST00000429441 717 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 PRELID3BP10-201ENST00000431957 584 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 GAPDHP58-201ENST00000438477 1006 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ELOCP8-201ENST00000439309 332 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ELOCP15-201ENST00000442090 332 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TAF9P1-201ENST00000445421 515 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 YWHAEP1-201ENST00000453697 763 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 PPIAP27-201ENST00000453800 265 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TAF9P2-201ENST00000454958 515 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC091860.1-201ENST00000505723 432 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AF213884.2-201ENST00000510417 903 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC108120.2-201ENST00000512973 294 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 RNU6-232P-201ENST00000517144 64 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 HMGN2P36-201ENST00000529541 409 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC007115.1-201ENST00000546853 234 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 DEFB131E-202ENST00000602581 683 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AP000811.1-201ENST00000603803 651 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 NANOGP3-201ENST00000605855 286 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC084035.1-201ENST00000634543 607 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AP002833.3-201ENST00000625075 2265 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL078621.3-201ENST00000623707 2042 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 AL390237.1-201ENST00000404226 1415 ntBASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHAMP1Q96JM3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AC019178.2-201ENST00000423595 505 ntBASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AC098826.1-201ENST00000433943 471 ntBASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AC006335.2-201ENST00000437993 330 ntBASIC6.41□□□□□ -1.38
CHAMP1Q96JM3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms