Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RPS11P7-201ENST00000442125 465 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 ARL5AP2-201ENST00000444698 533 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AL645937.3-201ENST00000453647 936 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 CYCSP53-201ENST00000455540 265 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC093166.2-201ENST00000455969 1017 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC100832.1-201ENST00000471945 383 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 MTND6P6-201ENST00000478031 263 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 EIF1P7-201ENST00000487533 337 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RN7SL447P-201ENST00000494711 245 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 UBTFL9-201ENST00000534504 1148 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC024940.3-201ENST00000538551 316 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 ADAD1P2-201ENST00000588476 646 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC115085.1-201ENST00000588924 229 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AP005432.2-201ENST00000608162 586 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RNA5SP440-201ENST00000612665 119 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RN7SL787P-201ENST00000613000 284 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 CYP4F35P-202ENST00000636121 390 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 AC017007.4-201ENST00000503353 1352 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS33AQ96AX1 HSPA8P19-201ENST00000505359 1517 ntBASIC4.87□□□□□ -1.63
VPS33AQ96AX1 OR51H2P-202ENST00000641424 3046 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 OR6K3-202ENST00000368146 996 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 SNORA2.3-201ENST00000383920 135 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 ATP5F1P6-201ENST00000402768 767 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC099535.1-201ENST00000408928 371 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 ETF1P3-201ENST00000430422 1160 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC011225.1-201ENST00000457751 369 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 OR52A4P-201ENST00000472867 958 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC084757.1-201ENST00000559987 490 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AL353600.1-201ENST00000608148 251 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 VN2R3P-201ENST00000422626 1412 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 MTCO1P4-201ENST00000520516 1409 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AL353743.4-201ENST00000422653 1547 ntBASIC4.86□□□□□ -1.63
VPS33AQ96AX1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS33AQ96AX1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 AC139713.2-215ENST00000641428 5037 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RN7SKP124-201ENST00000364730 341 ntBASIC4.85□□□□□ -1.63
VPS33AQ96AX1 RN7SKP199-201ENST00000410325 305 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms