Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 AC125257.1-201ENST00000560400 2930 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 ZNF137P-201ENST00000456718 1920 ntBASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CDKL3Q8IVW4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CDKL3Q8IVW4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CDKL3Q8IVW4 OR14L1P-202ENST00000641545 3009 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 NCSTNP1-201ENST00000406229 144 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC009237.10-201ENST00000414112 510 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 ATG4AP1-201ENST00000416893 538 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 RPL23AP25-201ENST00000430973 463 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC091685.2-201ENST00000454924 864 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC113430.1-201ENST00000506872 718 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AP001804.2-201ENST00000533932 910 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 PCNPP1-201ENST00000552501 511 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 MIR4737-201ENST00000583979 81 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC098935.2-201ENST00000604222 466 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AL021707.7-201ENST00000607991 416 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AC133644.2-201ENST00000608142 540 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 MIR7155-201ENST00000615925 56 ntBASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDKL3Q8IVW4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RNA5SP372-201ENST00000390836 115 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC104297.1-201ENST00000393779 870 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 PTMAP6-201ENST00000439110 327 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC005008.1-201ENST00000456151 612 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 SCARNA10-201ENST00000459255 330 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RN7SL329P-201ENST00000467740 299 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RN7SL817P-201ENST00000480777 288 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RNA5SP360-201ENST00000516555 118 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RNU6-943P-201ENST00000516960 98 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AP001922.4-201ENST00000526967 290 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC091042.1-201ENST00000579213 173 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 ADAD1P2-201ENST00000588476 646 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 uc_338.18-201ENST00000615451 175 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 LINC00901.1-201ENST00000617252 152 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC091905.2-201ENST00000623143 306 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 AC132825.1-201ENST00000463573 2247 ntBASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDKL3Q8IVW4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AC131971.1-201ENST00000332881 1482 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AL590240.1-201ENST00000334118 313 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 IL6STP1-201ENST00000346911 1020 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 SNORA58B-201ENST00000364259 136 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 RPL21P108-201ENST00000413857 481 ntBASIC4.69□□□□□ -1.66
CDKL3Q8IVW4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms