Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 RPSAP51-201ENST00000497462 645 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 CAB39P1-201ENST00000502277 460 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC111193.1-201ENST00000504097 155 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC034205.1-201ENST00000520621 638 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 OR4A43P-201ENST00000532938 908 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 GCSHP4-201ENST00000538792 439 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 MIR4284-201ENST00000578924 81 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 MIR5096-201ENST00000583713 70 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AL391834.2-201ENST00000609982 546 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC132825.7-201ENST00000638744 335 ntBASIC5.6□□□□□ -1.51
HERC6Q8IVU3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.6□□□□□ -1.51
HERC6Q8IVU3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC079097.1-201ENST00000512187 1399 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 RNU6-1000P-201ENST00000391066 106 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 OR8V1P-201ENST00000395193 873 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 Z97832.1-201ENST00000402490 328 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ATF1P1-201ENST00000406040 927 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AL158825.1-201ENST00000414735 521 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 VN1R37P-201ENST00000419096 748 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 MTCO3P4-201ENST00000419236 787 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC009480.2-201ENST00000422916 432 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC093422.3-201ENST00000428506 305 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC005189.1-201ENST00000431286 310 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC073465.2-201ENST00000440938 498 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AL035551.1-201ENST00000446931 348 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC022431.1-201ENST00000450941 438 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 RPS23P7-201ENST00000466210 444 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 IGKV1-32-201ENST00000519290 311 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.59□□□□□ -1.51
HERC6Q8IVU3 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HERC6Q8IVU3 AC026523.2-201ENST00000625039 7739 ntBASIC5.59□□□□□ -1.52
HERC6Q8IVU3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HERC6Q8IVU3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC104964.3-201ENST00000606115 2860 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC093775.1-201ENST00000624154 1868 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 SNORA70.2-201ENST00000364506 135 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.58□□□□□ -1.52
HERC6Q8IVU3 AC068538.1-201ENST00000376856 336 ntBASIC5.58□□□□□ -1.52
HERC6Q8IVU3 RNU6-354P-201ENST00000383862 107 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms