Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC008627.1-201ENST00000517511 1704 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC091305.2-201ENST00000624049 1576 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC114786.1-201ENST00000512892 1415 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 RNU1-134P-201ENST00000362935 165 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 RNA5SP284-201ENST00000384547 118 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 RN7SKP56-201ENST00000410513 331 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 MTND6P12-201ENST00000428247 522 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC005033.1-201ENST00000428904 813 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL512649.1-201ENST00000428997 581 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 VDAC1P6-201ENST00000430062 855 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 RPL37P1-201ENST00000432310 284 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL596276.1-201ENST00000434465 418 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC002504.1-201ENST00000438281 691 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC092427.1-201ENST00000439177 601 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 MTCO1P48-201ENST00000448024 1096 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 RPL31P15-201ENST00000449770 338 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 ACA64.1-201ENST00000459171 127 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 SNORD46.2-201ENST00000516021 102 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 SCARNA21.2-201ENST00000516600 166 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 OR6C7P-201ENST00000547875 934 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC018552.1-201ENST00000562099 811 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC007448.1-201ENST00000582714 234 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC104785.1-201ENST00000603220 588 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC091805.2-201ENST00000603848 235 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL109618.2-201ENST00000605527 211 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 SNORD91A-202ENST00000609620 191 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC126175.1-201ENST00000617041 758 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AC012414.7-202ENST00000622705 1090 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TSHZ2-205ENST00000626626 670 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL132640.3-201ENST00000630473 177 ntBASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.79□□□□□ -1.32
NPAS4Q8IUM7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC096921.2-201ENST00000561507 1916 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 OR2M1P-201ENST00000318104 951 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 RNA5SP273-201ENST00000362484 113 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC007066.1-201ENST00000392902 381 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PRRC2CP1-201ENST00000404428 159 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AL512430.2-201ENST00000406786 339 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 NPM1P40-201ENST00000412758 733 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC008280.1-201ENST00000418851 412 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 RPL21P32-201ENST00000419877 477 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC009965.2-201ENST00000425328 970 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 AC010881.1-201ENST00000433830 235 ntBASIC6.78□□□□□ -1.32
NPAS4Q8IUM7 PPIAP10-201ENST00000438675 458 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms