Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LSM1P1-201ENST00000438629 273 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 RPL23AP8-201ENST00000479812 475 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 HMGN1P16-201ENST00000508308 283 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 SCARNA6-201ENST00000515982 265 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC120036.3-201ENST00000517826 292 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 TPM3P3-201ENST00000521343 354 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC093012.1-202ENST00000549403 582 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AP001180.3-201ENST00000582221 145 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 Z95327.3-201ENST00000610385 572 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC243773.3-201ENST00000613270 256 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 uc_338.31-201ENST00000615595 186 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC003973.3-201ENST00000624863 2822 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 OR2AH1P-202ENST00000641232 2744 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 AC119744.1-201ENST00000454746 1715 ntBASIC7.27□□□□□ -1.25
RNF135Q8IUD6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC7.27□□□□□ -1.25
RNF135Q8IUD6 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 OR52B5P-204ENST00000641744 3467 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RPL5P5-201ENST00000392009 893 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 PSMA6P1-201ENST00000400275 741 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MIR320C1-201ENST00000408566 88 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RNU6-272P-201ENST00000411028 104 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RSU1P3-201ENST00000412878 835 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 SDCBPP2-201ENST00000424643 885 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RPL5P34-201ENST00000426545 891 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC007679.3-201ENST00000434035 414 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC104698.1-201ENST00000435671 276 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MTCYBP6-201ENST00000441810 138 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MTCO1P27-201ENST00000448269 226 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 Z83838.1-202ENST00000456225 839 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AL161747.1-201ENST00000480068 358 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 MTND1P3-201ENST00000484956 952 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RPL39P36-201ENST00000490784 156 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 RN7SL362P-201ENST00000494228 267 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC008629.2-201ENST00000503783 483 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC025674.1-201ENST00000507074 324 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 HSPA8P13-201ENST00000523715 472 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC090515.3-201ENST00000560431 315 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AL162413.1-201ENST00000603198 110 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC012175.1-201ENST00000603755 531 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AL359999.1-201ENST00000604513 294 ntBASIC7.26□□□□□ -1.25
RNF135Q8IUD6 AC104184.1-201ENST00000607513 721 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms