Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC090017.1-201ENST00000548612 1779 ntBASIC5.21□□□□□ -1.57
PRPF39Q86UA1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PRPF39Q86UA1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC107027.3-201ENST00000565095 3473 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 SNURFL-201ENST00000309296 343 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC019070.1-201ENST00000415008 1024 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 RPS26P47-201ENST00000427219 348 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AL031663.1-201ENST00000437445 219 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 RPL31P44-201ENST00000447680 377 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 BTF3P6-201ENST00000448054 499 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 HIGD1AP8-201ENST00000453927 274 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC091685.2-201ENST00000454924 864 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC005229.2-201ENST00000456995 399 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 RPS20P4-201ENST00000461659 355 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 NPM1P29-201ENST00000483112 803 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC005412.2-201ENST00000492004 341 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC008628.1-201ENST00000508663 265 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 CDH12P4-201ENST00000517835 295 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 CDH12P3-201ENST00000517935 295 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 CDH12P1-201ENST00000518435 295 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 MIR3934-201ENST00000579806 107 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC011487.3-201ENST00000593607 453 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ZNF92P2-201ENST00000600543 1059 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC005084.1-201ENST00000605160 304 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC093799.2-201ENST00000610062 578 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 BNIP3P41-202ENST00000616656 861 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC016957.2-201ENST00000616998 848 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 BX005214.3-202ENST00000619809 325 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC091905.4-201ENST00000623432 202 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 AL731566.1-201ENST00000620490 1937 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PRPF39Q86UA1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC013442.1-201ENST00000397347 228 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC007738.1-201ENST00000413892 348 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 DDX39BP1-205ENST00000422507 192 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC074367.1-201ENST00000438685 1125 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC097499.1-201ENST00000444277 208 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 snoU13.20-201ENST00000459180 104 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 RPS4XP12-201ENST00000461747 709 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC107918.3-201ENST00000533272 382 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC018618.2-201ENST00000604770 446 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC116447.1-201ENST00000613153 453 ntBASIC5.2□□□□□ -1.58
PRPF39Q86UA1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.2□□□□□ -1.58
PRPF39Q86UA1 AC100827.5-201ENST00000615883 426 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms