Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC005014.3-201ENST00000605985 190 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 AC020978.9-201ENST00000624380 1141 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 MTCO1P4-201ENST00000520516 1409 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 AC100778.3-201ENST00000580060 1750 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 INTS6P1-201ENST00000504674 2530 ntBASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNX30Q5VWJ9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC093311.1-201ENST00000506586 2021 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 BX005019.1-201ENST00000561881 1810 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 ZNF652P1-201ENST00000442420 1309 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 OR13Z1P-201ENST00000416141 834 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC092570.3-201ENST00000420113 693 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 RPL7P55-201ENST00000450522 746 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 CYCSP42-201ENST00000450823 238 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 RPL7P61-201ENST00000451721 751 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 HIGD1AP8-201ENST00000453927 274 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 RNA5SP103-201ENST00000459503 118 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 RN7SL591P-201ENST00000496150 292 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 COX6B1P5-201ENST00000509843 249 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 OR7E128P-201ENST00000532736 1024 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC084759.1-201ENST00000561168 290 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 OR1F2P-201ENST00000570470 933 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC011840.5-201ENST00000582125 771 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 MIR4691-201ENST00000583764 85 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC090525.3-201ENST00000605601 189 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AP001005.3-201ENST00000622049 129 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 AC091905.4-201ENST00000623432 202 ntBASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNX30Q5VWJ9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL672167.1-204ENST00000641875 3017 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL022393.1-201ENST00000625142 1677 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 CASC19-221ENST00000641309 1382 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 METTL21EP-201ENST00000298105 713 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RNA5SP123-201ENST00000363244 119 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RN7SKP113-201ENST00000363891 295 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 SNORA62.2-201ENST00000364672 152 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RN7SKP97-201ENST00000410966 333 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC010385.1-201ENST00000412374 256 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RPL12P9-201ENST00000412942 488 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 LINC01347-201ENST00000417964 355 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 RBMY2KP-201ENST00000418221 992 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 AC048351.1-201ENST00000420064 602 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 PNRC2P1-201ENST00000423940 420 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 VN1R42P-201ENST00000424651 344 ntBASIC5.34□□□□□ -1.55
SNX30Q5VWJ9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms