Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OR52H1-202ENST00000641796 1061 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AL136164.3-201ENST00000624429 3978 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 AL359922.3-201ENST00000624779 1670 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.36□□□□□ -1.55
GABPAQ06546 CUL4AP1-201ENST00000514750 1863 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GABPAQ06546 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.36□□□□□ -1.55
GABPAQ06546 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GABPAQ06546 SMG1P4-204ENST00000523028 4131 ntBASIC5.36□□□□□ -1.55
GABPAQ06546 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.35□□□□□ -1.55
GABPAQ06546 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GABPAQ06546 LINC00622-201ENST00000562811 1570 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 MTCO1P8-201ENST00000416914 1523 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 CR382285.2-201ENST00000624662 1495 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GABPAQ06546 AC096644.3-201ENST00000416788 338 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GABPAQ06546 AL139095.3-201ENST00000419672 1203 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 RAD23BP1-201ENST00000421404 1227 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 RPL21P43-201ENST00000425440 472 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 NMNAT1P2-201ENST00000435192 860 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 RPL10P17-201ENST00000453852 316 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 RPS27AP16-201ENST00000492222 470 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.35□□□□□ -1.55
GABPAQ06546 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.35□□□□□ -1.55
GABPAQ06546 RNU6-751P-201ENST00000516382 101 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.35□□□□□ -1.55
GABPAQ06546 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.35□□□□□ -1.55
GABPAQ06546 AL049874.4-201ENST00000557593 255 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.35□□□□□ -1.55
GABPAQ06546 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 AC130352.1-201ENST00000602979 661 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GABPAQ06546 MIR6830-201ENST00000636015 70 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 OR2L1P-202ENST00000641567 1023 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 AC025031.4-201ENST00000621248 3271 ntBASIC5.35□□□□□ -1.55
GABPAQ06546 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.35□□□□□ -1.55
GABPAQ06546 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.35□□□□□ -1.55
GABPAQ06546 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
GABPAQ06546 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.34□□□□□ -1.55
GABPAQ06546 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
GABPAQ06546 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GABPAQ06546 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GABPAQ06546 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GABPAQ06546 RNU6-1331P-201ENST00000363658 106 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 AL080315.1-201ENST00000406055 466 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.34□□□□□ -1.55
GABPAQ06546 RPS29P17-201ENST00000430795 166 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 GTF3AP5-201ENST00000442645 697 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 AC103987.1-201ENST00000473394 348 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
GABPAQ06546 OR52A4P-203ENST00000498233 1014 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.34□□□□□ -1.55
GABPAQ06546 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.34□□□□□ -1.55
GABPAQ06546 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
GABPAQ06546 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.34□□□□□ -1.55
GABPAQ06546 KPNA2P3-201ENST00000584190 848 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 MIR3138-201ENST00000585238 82 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 AC023762.1-201ENST00000603280 584 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 AC006338.2-201ENST00000616864 791 ntBASIC5.34□□□□□ -1.55
GABPAQ06546 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GABPAQ06546 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.34□□□□□ -1.55
GABPAQ06546 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
GABPAQ06546 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.34□□□□□ -1.56
GABPAQ06546 MTCO1P7-201ENST00000419523 1542 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPAQ06546 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPAQ06546 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPAQ06546 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
GABPAQ06546 OR4K17-201ENST00000315543 1032 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 OR56B2P-201ENST00000317102 954 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 RNU1-83P-201ENST00000363426 164 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 AC007068.1-201ENST00000396690 844 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPAQ06546 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPAQ06546 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 RPL7AP52-201ENST00000458096 790 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 SEPT7P6-201ENST00000469999 1143 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.33□□□□□ -1.56
GABPAQ06546 AC093267.1-201ENST00000489176 961 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
GABPAQ06546 AC093840.1-201ENST00000511599 336 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 AC015795.1-201ENST00000513669 327 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPAQ06546 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.33□□□□□ -1.56
GABPAQ06546 AL391597.1-201ENST00000618707 694 ntBASIC5.33□□□□□ -1.56
GABPAQ06546 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.33□□□□□ -1.56
GABPAQ06546 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms