Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AL110118.1-201ENST00000553543 400 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AL121839.1-201ENST00000556233 1185 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 MIR4480-201ENST00000582492 71 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 AL512782.1-201ENST00000603093 364 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC073091.2-201ENST00000603205 907 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 AC091953.3-201ENST00000623220 236 ntBASIC4.41□□□□□ -1.7
HMGCS1Q01581 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGCS1Q01581 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS1Q01581 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
HMGCS1Q01581 AC000123.3-201ENST00000624029 4975 ntBASIC4.4□□□□□ -1.7
HMGCS1Q01581 SCN1A-220ENST00000641603 12506 ntBASIC4.4□□□□□ -1.7
HMGCS1Q01581 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.4□□□□□ -1.7
HMGCS1Q01581 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 RN7SKP103-201ENST00000363848 320 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 SNORA68.2-201ENST00000391263 128 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AL035419.1-201ENST00000397037 564 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AL139128.1-201ENST00000413921 941 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 ATG4AP1-201ENST00000416893 538 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 RBMY2KP-201ENST00000418221 992 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 AL360081.1-201ENST00000428299 555 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC016831.4-201ENST00000438302 307 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AL772161.1-201ENST00000439130 476 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 SBDSP1-204ENST00000453858 737 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AP002371.1-201ENST00000463604 433 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC104763.1-201ENST00000475274 360 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AP001960.1-201ENST00000506494 658 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC021146.3-201ENST00000511911 260 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 UBE2FP2-201ENST00000566646 462 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 ADAD1P2-201ENST00000588476 646 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AC026979.4-201ENST00000606555 645 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 AP005212.4-201ENST00000614206 710 ntBASIC4.4□□□□□ -1.71
HMGCS1Q01581 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS1Q01581 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCS1Q01581 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCS1Q01581 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC010928.1-201ENST00000592477 1447 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 MAPK10-263ENST00000641052 4307 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS1Q01581 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 Z98745.1-201ENST00000402553 494 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 VN1R31P-201ENST00000417498 730 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 BX510359.2-201ENST00000417920 305 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL049745.1-201ENST00000433953 286 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 ARL4AP3-201ENST00000441452 574 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC005008.1-201ENST00000456151 612 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 RPL21P6-201ENST00000479171 504 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL390726.5-202ENST00000564800 256 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 VN1R81P-201ENST00000602085 372 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC008536.1-201ENST00000602872 669 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC103792.1-201ENST00000603591 919 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC098935.2-201ENST00000604222 466 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL713998.2-201ENST00000604538 1198 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 U3.53-201ENST00000628922 216 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS1Q01581 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCS1Q01581 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGCS1Q01581 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
HMGCS1Q01581 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 AC005332.5-201ENST00000591222 2919 ntBASIC4.38□□□□□ -1.71
HMGCS1Q01581 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 IL6STP1-201ENST00000346911 1020 ntBASIC4.38□□□□□ -1.71
HMGCS1Q01581 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.38□□□□□ -1.71
HMGCS1Q01581 RN7SKP224-201ENST00000364140 325 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms