Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.86□□□□□ -1.63
GTF2BQ00403 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GTF2BQ00403 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.86□□□□□ -1.63
GTF2BQ00403 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
GTF2BQ00403 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
GTF2BQ00403 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 AC139713.2-214ENST00000642059 1811 ntBASIC4.86□□□□□ -1.63
GTF2BQ00403 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
GTF2BQ00403 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 AC093591.2-201ENST00000565254 3843 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GTF2BQ00403 RNU6-249P-201ENST00000363016 102 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 RNA5SP447-201ENST00000363749 119 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 RNU1-44P-201ENST00000384453 163 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AL078604.1-201ENST00000404609 466 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 RNA5SP296-201ENST00000410523 111 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.85□□□□□ -1.63
GTF2BQ00403 AL732292.1-201ENST00000426692 226 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.85□□□□□ -1.63
GTF2BQ00403 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 RN7SL817P-201ENST00000480777 288 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 DEFB109F-201ENST00000491870 277 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AC015795.1-201ENST00000513669 327 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.85□□□□□ -1.63
GTF2BQ00403 AC021483.2-201ENST00000567415 758 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AL160290.3-201ENST00000604869 165 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AC090948.1-201ENST00000607464 549 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AL035461.2-201ENST00000619201 524 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 AC007546.2-201ENST00000623996 360 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.85□□□□□ -1.63
GTF2BQ00403 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
GTF2BQ00403 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 MFSD8-242ENST00000641690 4199 ntBASIC4.85□□□□□ -1.63
GTF2BQ00403 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
GTF2BQ00403 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
GTF2BQ00403 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
GTF2BQ00403 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.84□□□□□ -1.63
GTF2BQ00403 RNU4-39P-201ENST00000362455 127 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
GTF2BQ00403 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.84□□□□□ -1.63
GTF2BQ00403 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.84□□□□□ -1.63
GTF2BQ00403 AC013356.1-201ENST00000489027 564 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 RPS27AP16-201ENST00000492222 470 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.84□□□□□ -1.63
GTF2BQ00403 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.84□□□□□ -1.63
GTF2BQ00403 BTG4P1-201ENST00000510421 183 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 LDHBP3-201ENST00000514909 822 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.84□□□□□ -1.63
GTF2BQ00403 AL356218.2-201ENST00000605264 187 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.84□□□□□ -1.63
GTF2BQ00403 MIR7641-1-201ENST00000627518 61 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.84□□□□□ -1.63
GTF2BQ00403 NOL8P1-201ENST00000508336 3529 ntBASIC4.84□□□□□ -1.63
GTF2BQ00403 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.84□□□□□ -1.63
GTF2BQ00403 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
GTF2BQ00403 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
GTF2BQ00403 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GTF2BQ00403 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
GTF2BQ00403 AC025031.4-201ENST00000621248 3271 ntBASIC4.84□□□□□ -1.64
GTF2BQ00403 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
GTF2BQ00403 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GTF2BQ00403 AC105074.1-201ENST00000623380 3095 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
GTF2BQ00403 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GTF2BQ00403 U3.22-201ENST00000391120 215 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 SNORA11F-201ENST00000408237 128 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 SEPT7P8-201ENST00000413308 775 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 AC004448.2-201ENST00000422360 586 ntBASIC4.83□□□□□ -1.64
GTF2BQ00403 DNAJC19P7-201ENST00000428811 344 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms