Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC011416.1-201ENST00000514947 1732 ntBASIC5.95□□□□□ -1.46
YBX1P67809 RN7SKP67-201ENST00000515905 235 ntBASIC5.95□□□□□ -1.46
YBX1P67809 RNA5SP434-201ENST00000516647 121 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AC011853.1-201ENST00000518911 454 ntBASIC5.95□□□□□ -1.46
YBX1P67809 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.95□□□□□ -1.46
YBX1P67809 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.95□□□□□ -1.46
YBX1P67809 AC084121.1-201ENST00000533882 835 ntBASIC5.95□□□□□ -1.46
YBX1P67809 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
YBX1P67809 AC005832.3-201ENST00000537929 631 ntBASIC5.95□□□□□ -1.46
YBX1P67809 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.95□□□□□ -1.46
YBX1P67809 AC026826.3-201ENST00000561747 158 ntBASIC5.95□□□□□ -1.46
YBX1P67809 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
YBX1P67809 MIR4528-201ENST00000577763 90 ntBASIC5.95□□□□□ -1.46
YBX1P67809 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.95□□□□□ -1.46
YBX1P67809 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.95□□□□□ -1.46
YBX1P67809 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.95□□□□□ -1.46
YBX1P67809 AP000907.4-201ENST00000604143 237 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AL390816.3-201ENST00000604527 1066 ntBASIC5.95□□□□□ -1.46
YBX1P67809 SNORA74.4-201ENST00000607595 199 ntBASIC5.95□□□□□ -1.46
YBX1P67809 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.95□□□□□ -1.46
YBX1P67809 AL359697.1-201ENST00000624879 587 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.95□□□□□ -1.46
YBX1P67809 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
YBX1P67809 AC079753.1-201ENST00000623243 3868 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AC015799.1-201ENST00000622996 3122 ntBASIC5.95□□□□□ -1.46
YBX1P67809 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
YBX1P67809 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.95□□□□□ -1.46
YBX1P67809 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.95□□□□□ -1.46
YBX1P67809 TEX21P-201ENST00000447107 1476 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AC117409.1-201ENST00000470499 1310 ntBASIC5.95□□□□□ -1.46
YBX1P67809 AL355834.1-201ENST00000556602 3965 ntBASIC5.95□□□□□ -1.46
YBX1P67809 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
YBX1P67809 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.95□□□□□ -1.46
YBX1P67809 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.95□□□□□ -1.46
YBX1P67809 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
YBX1P67809 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 MAPK10-270ENST00000641102 3538 ntBASIC5.94□□□□□ -1.46
YBX1P67809 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 AL079343.1-201ENST00000572358 1771 ntBASIC5.94□□□□□ -1.46
YBX1P67809 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
YBX1P67809 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
YBX1P67809 FUNDC2P3-201ENST00000334716 533 ntBASIC5.94□□□□□ -1.46
YBX1P67809 RNA5SP375-201ENST00000362975 119 ntBASIC5.94□□□□□ -1.46
YBX1P67809 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 NUP35P2-201ENST00000416748 943 ntBASIC5.94□□□□□ -1.46
YBX1P67809 RNGTTP1-201ENST00000420965 728 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC066692.1-201ENST00000421721 457 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC012498.1-201ENST00000424037 437 ntBASIC5.94□□□□□ -1.46
YBX1P67809 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 FAM96AP1-201ENST00000430879 482 ntBASIC5.94□□□□□ -1.46
YBX1P67809 MTND1P28-201ENST00000435623 950 ntBASIC5.94□□□□□ -1.46
YBX1P67809 MTCO3P18-201ENST00000440206 761 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AL512593.1-201ENST00000444758 779 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 HMGB1P7-201ENST00000450921 612 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC112187.1-201ENST00000455837 479 ntBASIC5.94□□□□□ -1.46
YBX1P67809 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.94□□□□□ -1.46
YBX1P67809 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 AP002453.1-201ENST00000492327 668 ntBASIC5.94□□□□□ -1.46
YBX1P67809 RPL9P6-201ENST00000492764 598 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 RNA5SP400-201ENST00000517155 111 ntBASIC5.94□□□□□ -1.46
YBX1P67809 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 IGKV3D-25-201ENST00000519599 235 ntBASIC5.94□□□□□ -1.46
YBX1P67809 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 OR5AK3P-201ENST00000527486 1297 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AP005639.2-201ENST00000527592 928 ntBASIC5.94□□□□□ -1.46
YBX1P67809 RPA2P3-201ENST00000533268 770 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
YBX1P67809 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.94□□□□□ -1.46
YBX1P67809 YWHABP2-201ENST00000540201 713 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 RBM22P12-201ENST00000567098 1255 ntBASIC5.94□□□□□ -1.46
YBX1P67809 OR4K7P-201ENST00000580232 945 ntBASIC5.94□□□□□ -1.46
YBX1P67809 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.94□□□□□ -1.46
YBX1P67809 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 DYNLL1P1-201ENST00000595442 269 ntBASIC5.94□□□□□ -1.46
YBX1P67809 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
YBX1P67809 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.94□□□□□ -1.46
YBX1P67809 AC008555.7-201ENST00000605008 583 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC012557.1-201ENST00000607115 611 ntBASIC5.94□□□□□ -1.46
YBX1P67809 AC064836.2-201ENST00000609491 462 ntBASIC5.94□□□□□ -1.46
YBX1P67809 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.94□□□□□ -1.46
YBX1P67809 AP005264.7-201ENST00000625003 745 ntBASIC5.94□□□□□ -1.46
YBX1P67809 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
YBX1P67809 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.94□□□□□ -1.46
YBX1P67809 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
YBX1P67809 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms