Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.46□□□□□ -1.7
VSX2P58304 AL137072.1-201ENST00000603444 466 ntBASIC4.46□□□□□ -1.7
VSX2P58304 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.46□□□□□ -1.7
VSX2P58304 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VSX2P58304 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.46□□□□□ -1.7
VSX2P58304 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.46□□□□□ -1.7
VSX2P58304 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VSX2P58304 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.7
VSX2P58304 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VSX2P58304 AC120338.1-201ENST00000625074 1541 ntBASIC4.46□□□□□ -1.7
VSX2P58304 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VSX2P58304 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VSX2P58304 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VSX2P58304 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
VSX2P58304 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 AC104118.1-201ENST00000607625 1589 ntBASIC4.45□□□□□ -1.7
VSX2P58304 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VSX2P58304 AC123912.3-201ENST00000600907 1367 ntBASIC4.45□□□□□ -1.7
VSX2P58304 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VSX2P58304 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 SNORA71.2-201ENST00000364941 134 ntBASIC4.45□□□□□ -1.7
VSX2P58304 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 OR51B3P-201ENST00000412287 913 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.45□□□□□ -1.7
VSX2P58304 RPL7P57-201ENST00000423238 740 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.45□□□□□ -1.7
VSX2P58304 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 AC011753.3-201ENST00000443436 406 ntBASIC4.45□□□□□ -1.7
VSX2P58304 ARL2BPP10-201ENST00000446487 531 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 AC108463.1-201ENST00000450258 347 ntBASIC4.45□□□□□ -1.7
VSX2P58304 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 AP002371.1-201ENST00000463604 433 ntBASIC4.45□□□□□ -1.7
VSX2P58304 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 AC104763.1-201ENST00000475274 360 ntBASIC4.45□□□□□ -1.7
VSX2P58304 RPL36AP41-201ENST00000493820 306 ntBASIC4.45□□□□□ -1.7
VSX2P58304 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.45□□□□□ -1.7
VSX2P58304 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.45□□□□□ -1.7
VSX2P58304 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 AC105129.1-201ENST00000560250 297 ntBASIC4.45□□□□□ -1.7
VSX2P58304 ADAM3B-201ENST00000569937 840 ntBASIC4.45□□□□□ -1.7
VSX2P58304 RN7SL690P-201ENST00000582087 240 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AC068790.7-201ENST00000602347 528 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AC133552.5-201ENST00000604266 540 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AC096553.1-201ENST00000605169 829 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AC067838.1-201ENST00000606064 577 ntBASIC4.45□□□□□ -1.7
VSX2P58304 AP000346.3-201ENST00000622821 210 ntBASIC4.45□□□□□ -1.7
VSX2P58304 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VSX2P58304 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
VSX2P58304 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.45□□□□□ -1.7
VSX2P58304 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 Z95327.2-201ENST00000414579 1873 ntBASIC4.45□□□□□ -1.7
VSX2P58304 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VSX2P58304 AC027290.2-201ENST00000623210 18662 ntBASIC4.44□□□□□ -1.7
VSX2P58304 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VSX2P58304 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VSX2P58304 ZNF137P-201ENST00000456718 1920 ntBASIC4.44□□□□□ -1.7
VSX2P58304 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
VSX2P58304 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.44□□□□□ -1.7
VSX2P58304 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VSX2P58304 UGT2B26P-201ENST00000508672 1613 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AC010132.2-201ENST00000295493 1043 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AL672167.2-201ENST00000377164 879 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AL080315.1-201ENST00000406055 466 ntBASIC4.44□□□□□ -1.7
VSX2P58304 FAR2P2-201ENST00000413041 594 ntBASIC4.44□□□□□ -1.7
VSX2P58304 FAR2P4-202ENST00000425399 584 ntBASIC4.44□□□□□ -1.7
VSX2P58304 BTG3P1-201ENST00000435859 716 ntBASIC4.44□□□□□ -1.7
VSX2P58304 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VSX2P58304 TPT1P13-201ENST00000449760 499 ntBASIC4.44□□□□□ -1.7
VSX2P58304 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.44□□□□□ -1.7
VSX2P58304 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.44□□□□□ -1.7
VSX2P58304 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.44□□□□□ -1.7
VSX2P58304 AC016687.1-201ENST00000482574 353 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AC098799.3-201ENST00000506095 438 ntBASIC4.44□□□□□ -1.7
VSX2P58304 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.44□□□□□ -1.7
VSX2P58304 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.44□□□□□ -1.7
VSX2P58304 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VSX2P58304 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.44□□□□□ -1.7
VSX2P58304 AC022616.2-201ENST00000523185 300 ntBASIC4.44□□□□□ -1.7
VSX2P58304 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VSX2P58304 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.44□□□□□ -1.7
VSX2P58304 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.44□□□□□ -1.7
VSX2P58304 AC234771.5-201ENST00000600161 514 ntBASIC4.44□□□□□ -1.7
VSX2P58304 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.44□□□□□ -1.7
VSX2P58304 AL133338.2-201ENST00000604292 736 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AL008729.2-201ENST00000606393 473 ntBASIC4.44□□□□□ -1.7
VSX2P58304 AC004232.3-201ENST00000622977 525 ntBASIC4.44□□□□□ -1.7
VSX2P58304 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VSX2P58304 AC092111.2-201ENST00000611627 1414 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 446.9 ms