Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PAICSP4-201ENST00000517543 1253 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC018442.3-201ENST00000523025 183 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
GFRA1P56159 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC026826.3-201ENST00000561747 158 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.72□□□□□ -1.49
GFRA1P56159 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 MIR4675-201ENST00000577898 77 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 MIR4271-201ENST00000582451 67 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 AC112187.2-201ENST00000604345 283 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC009027.1-201ENST00000604510 479 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AF250324.2-201ENST00000608299 610 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AL008723.3-201ENST00000608926 449 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AP001521.1-201ENST00000609150 300 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC243773.3-201ENST00000613270 256 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 AC012254.5-201ENST00000623573 478 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 AC092162.3-201ENST00000624511 1624 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GFRA1P56159 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
GFRA1P56159 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 AC134882.1-201ENST00000603738 1676 ntBASIC5.72□□□□□ -1.49
GFRA1P56159 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.72□□□□□ -1.49
GFRA1P56159 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GFRA1P56159 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.71□□□□□ -1.49
GFRA1P56159 AC105235.1-201ENST00000623208 1816 ntBASIC5.71□□□□□ -1.49
GFRA1P56159 OLMALINC-203ENST00000641087 3779 ntBASIC5.71□□□□□ -1.49
GFRA1P56159 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.71□□□□□ -1.49
GFRA1P56159 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA1P56159 AC095050.2-201ENST00000510748 1458 ntBASIC5.71□□□□□ -1.49
GFRA1P56159 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.71□□□□□ -1.49
GFRA1P56159 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA1P56159 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA1P56159 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.71□□□□□ -1.49
GFRA1P56159 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
GFRA1P56159 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GFRA1P56159 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GFRA1P56159 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 RN7SKP237-201ENST00000364663 301 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC002524.1-201ENST00000411687 547 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AP000534.2-201ENST00000412729 568 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 USP9YP13-201ENST00000417797 480 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 RPL37P21-201ENST00000435890 276 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 AL645936.1-201ENST00000441979 518 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 RPS10P18-201ENST00000442662 495 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GFRA1P56159 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.71□□□□□ -1.5
GFRA1P56159 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 RPS23P9-201ENST00000448848 438 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 VN1R38P-201ENST00000450265 887 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC022431.1-201ENST00000450941 438 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AL033528.1-201ENST00000453780 140 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC027673.1-201ENST00000456245 405 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC097493.1-201ENST00000463958 372 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.71□□□□□ -1.5
GFRA1P56159 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 RN7SL326P-201ENST00000477493 296 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 RPL37P23-201ENST00000492641 294 ntBASIC5.71□□□□□ -1.5
GFRA1P56159 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.71□□□□□ -1.5
GFRA1P56159 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms