Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-1225P-201ENST00000516336 65 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AF279873.1-201ENST00000523393 313 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.21□□□□□ -1.58
SUMO3P55854 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.21□□□□□ -1.58
SUMO3P55854 HSPE1P2-201ENST00000554777 306 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 AL031281.1-201ENST00000604049 488 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC009220.3-201ENST00000604318 586 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 Z94722.1-201ENST00000604328 474 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AL603755.1-201ENST00000619504 163 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC004777.1-201ENST00000624317 287 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 MIR3974-201ENST00000637126 96 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC103706.2-201ENST00000638080 240 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 AC087565.3-203ENST00000641018 837 ntBASIC5.21□□□□□ -1.58
SUMO3P55854 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SUMO3P55854 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SUMO3P55854 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.21□□□□□ -1.58
SUMO3P55854 AC005539.1-201ENST00000443768 1479 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SUMO3P55854 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 AL159987.1-201ENST00000347911 293 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SUMO3P55854 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 TAF9BP1-201ENST00000396646 746 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 RNU4-72P-201ENST00000410754 173 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AL161449.1-201ENST00000414531 1199 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC009518.2-201ENST00000418056 731 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC019050.1-201ENST00000418508 492 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 OR10T1P-201ENST00000424327 947 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC127526.2-201ENST00000426436 775 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC242426.1-201ENST00000435270 960 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 RPS10P18-201ENST00000442662 495 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 DNAJC19P5-201ENST00000443295 316 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 Z99714.1-201ENST00000450463 807 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC010468.1-201ENST00000461022 817 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 RPL32P33-201ENST00000487023 394 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC011352.3-201ENST00000505162 593 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 GLUD1P3-202ENST00000508551 200 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC006499.4-201ENST00000510947 694 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.2□□□□□ -1.58
SUMO3P55854 AP001207.1-201ENST00000524051 481 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC004825.1-201ENST00000555068 586 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC008015.1-201ENST00000555505 465 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 GTF2IP8-201ENST00000560687 584 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 MIR4420-201ENST00000583944 77 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.2□□□□□ -1.58
SUMO3P55854 VN1R82P-201ENST00000601481 356 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AL109653.1-201ENST00000603091 248 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 Z99497.2-201ENST00000603634 310 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC069304.3-201ENST00000603938 1084 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC005252.1-201ENST00000604518 1063 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AL158042.1-201ENST00000605338 460 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 VIS1.1-201ENST00000610517 203 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.2□□□□□ -1.58
SUMO3P55854 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 AC068620.4-201ENST00000636730 1182 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.2□□□□□ -1.58
SUMO3P55854 AP003399.1-201ENST00000637534 361 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 OR8B1P-202ENST00000641132 1178 ntBASIC5.2□□□□□ -1.58
SUMO3P55854 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SUMO3P55854 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SUMO3P55854 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms