Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PKNOX1P55347 MTCO1P11-201ENST00000429111 1528 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PKNOX1P55347 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PKNOX1P55347 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 MT-RNR1-201ENST00000389680 954 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PKNOX1P55347 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 AL512430.2-201ENST00000406786 339 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.51□□□□□ -1.69
PKNOX1P55347 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 ARAFP1-201ENST00000422172 605 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 RPL21P91-201ENST00000429231 479 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.51□□□□□ -1.69
PKNOX1P55347 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 RPL7AP28-201ENST00000464513 571 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 AC008953.1-201ENST00000497334 318 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 BTF3P13-201ENST00000513224 490 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.51□□□□□ -1.69
PKNOX1P55347 RNA5SP446-201ENST00000515955 82 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 IGLV3-26-201ENST00000520756 302 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 FAM106CP-201ENST00000582212 507 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AL135786.2-201ENST00000608422 615 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 AL592494.3-201ENST00000609485 464 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 AC135352.1-201ENST00000506173 1418 ntBASIC4.51□□□□□ -1.69
PKNOX1P55347 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PKNOX1P55347 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.51□□□□□ -1.69
PKNOX1P55347 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PKNOX1P55347 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PKNOX1P55347 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.51□□□□□ -1.69
PKNOX1P55347 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKNOX1P55347 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PKNOX1P55347 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKNOX1P55347 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PKNOX1P55347 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.5□□□□□ -1.69
PKNOX1P55347 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PKNOX1P55347 MIR365B-201ENST00000362317 111 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 RNA5SP123-201ENST00000363244 119 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 RNA5SP28-201ENST00000363841 119 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PKNOX1P55347 RPL5P19-201ENST00000404228 893 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 OR2B7P-201ENST00000429302 934 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 RBMY2QP-201ENST00000429799 1147 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 CYCSP11-201ENST00000436426 315 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 CEACAMP7-201ENST00000444105 496 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 RAB28P3-201ENST00000448325 597 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 OR52J1P-201ENST00000450596 932 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 snoU13.20-201ENST00000459180 104 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AC093763.2-201ENST00000505334 1223 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
PKNOX1P55347 DYNLL1P4-201ENST00000549314 266 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.5□□□□□ -1.69
PKNOX1P55347 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.5□□□□□ -1.69
PKNOX1P55347 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.5□□□□□ -1.69
PKNOX1P55347 RN7SL652P-201ENST00000577769 300 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms