Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 TPTE2P1-204ENST00000435256 593 ntBASIC5.23□□□□□ -1.57
VCPP55072 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 TXNP5-201ENST00000441043 315 ntBASIC5.23□□□□□ -1.57
VCPP55072 AL137845.2-201ENST00000444292 988 ntBASIC5.23□□□□□ -1.57
VCPP55072 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 TCEA1P1-201ENST00000449716 880 ntBASIC5.23□□□□□ -1.57
VCPP55072 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 AC013356.1-201ENST00000489027 564 ntBASIC5.23□□□□□ -1.57
VCPP55072 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 MRPS33P2-201ENST00000507850 322 ntBASIC5.23□□□□□ -1.57
VCPP55072 AC026688.1-201ENST00000520639 1168 ntBASIC5.23□□□□□ -1.57
VCPP55072 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.23□□□□□ -1.57
VCPP55072 AC093765.1-201ENST00000603758 881 ntBASIC5.23□□□□□ -1.57
VCPP55072 AC067959.1-201ENST00000604334 379 ntBASIC5.23□□□□□ -1.57
VCPP55072 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.23□□□□□ -1.57
VCPP55072 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.23□□□□□ -1.57
VCPP55072 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.23□□□□□ -1.57
VCPP55072 SAMMSON-226ENST00000642089 1582 ntBASIC5.23□□□□□ -1.57
VCPP55072 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 THAP12P8-201ENST00000447914 2115 ntBASIC5.23□□□□□ -1.57
VCPP55072 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.23□□□□□ -1.57
VCPP55072 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VCPP55072 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VCPP55072 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
VCPP55072 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VCPP55072 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VCPP55072 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VCPP55072 SNORA68.2-201ENST00000391263 128 ntBASIC5.22□□□□□ -1.57
VCPP55072 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 RPL7P57-201ENST00000423238 740 ntBASIC5.22□□□□□ -1.57
VCPP55072 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.22□□□□□ -1.57
VCPP55072 AL732292.1-201ENST00000426692 226 ntBASIC5.22□□□□□ -1.57
VCPP55072 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 TXNP2-201ENST00000443918 295 ntBASIC5.22□□□□□ -1.57
VCPP55072 AC093166.2-201ENST00000455969 1017 ntBASIC5.22□□□□□ -1.57
VCPP55072 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 AC113398.2-201ENST00000507630 558 ntBASIC5.22□□□□□ -1.57
VCPP55072 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 AC008676.3-201ENST00000521237 435 ntBASIC5.22□□□□□ -1.57
VCPP55072 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.22□□□□□ -1.57
VCPP55072 MORF4L1P3-201ENST00000525966 950 ntBASIC5.22□□□□□ -1.57
VCPP55072 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.22□□□□□ -1.57
VCPP55072 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.22□□□□□ -1.57
VCPP55072 CD24P2-201ENST00000565486 219 ntBASIC5.22□□□□□ -1.57
VCPP55072 EIF1P5-201ENST00000585002 234 ntBASIC5.22□□□□□ -1.57
VCPP55072 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.22□□□□□ -1.57
VCPP55072 AP003499.2-201ENST00000624100 483 ntBASIC5.22□□□□□ -1.57
VCPP55072 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
VCPP55072 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VCPP55072 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.22□□□□□ -1.57
VCPP55072 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VCPP55072 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VCPP55072 ZNF652P1-201ENST00000442420 1309 ntBASIC5.22□□□□□ -1.57
VCPP55072 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.21□□□□□ -1.57
VCPP55072 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VCPP55072 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VCPP55072 AL731566.1-201ENST00000620490 1937 ntBASIC5.21□□□□□ -1.57
VCPP55072 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
VCPP55072 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VCPP55072 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
VCPP55072 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VCPP55072 SNORA70.10-201ENST00000384515 134 ntBASIC5.21□□□□□ -1.58
VCPP55072 AC104297.1-201ENST00000393779 870 ntBASIC5.21□□□□□ -1.58
VCPP55072 RPL17P50-201ENST00000396131 546 ntBASIC5.21□□□□□ -1.58
VCPP55072 SNORA11F-201ENST00000408237 128 ntBASIC5.21□□□□□ -1.58
VCPP55072 SNORA77-201ENST00000408716 125 ntBASIC5.21□□□□□ -1.58
VCPP55072 AF186996.5-201ENST00000418098 904 ntBASIC5.21□□□□□ -1.58
VCPP55072 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 OR2AH1P-201ENST00000425717 928 ntBASIC5.21□□□□□ -1.58
VCPP55072 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 AL450023.3-201ENST00000440592 271 ntBASIC5.21□□□□□ -1.58
VCPP55072 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VCPP55072 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VCPP55072 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VCPP55072 RN7SL319P-201ENST00000480656 221 ntBASIC5.21□□□□□ -1.58
VCPP55072 HMGB3P16-201ENST00000508037 287 ntBASIC5.21□□□□□ -1.58
VCPP55072 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.21□□□□□ -1.58
VCPP55072 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.21□□□□□ -1.58
VCPP55072 RNA5SP464-201ENST00000516251 108 ntBASIC5.21□□□□□ -1.58
VCPP55072 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.21□□□□□ -1.58
VCPP55072 TRAV11-201ENST00000539512 339 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms