Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LIMK2P53671 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 FAR2P2-201ENST00000413041 594 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 FAM204CP-201ENST00000424489 642 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 FAR2P4-202ENST00000425399 584 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC007559.1-201ENST00000428736 355 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 AL138878.2-201ENST00000440581 1241 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK2P53671 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC104629.2-201ENST00000468627 598 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SL860P-201ENST00000473738 223 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SL205P-201ENST00000490174 284 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC093890.1-201ENST00000502554 540 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 MRPS33P2-201ENST00000507850 322 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK2P53671 RNU6-491P-201ENST00000516099 110 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK2P53671 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 MIR3667-201ENST00000581025 74 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SL52P-201ENST00000584271 284 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 AC012467.1-201ENST00000607740 256 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SL722P-201ENST00000617780 284 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 RN7SL565P-201ENST00000618246 284 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.83□□□□□ -1.64
LIMK2P53671 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 SMG1P6-201ENST00000532337 2930 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
LIMK2P53671 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
LIMK2P53671 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 AL672167.1-205ENST00000641112 3080 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
LIMK2P53671 OR5T3-201ENST00000303059 1023 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LIMK2P53671 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 RPS4XP9-201ENST00000405151 780 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AMZ2P2-201ENST00000406819 1057 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 MTND3P20-201ENST00000407663 186 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.82□□□□□ -1.64
LIMK2P53671 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.82□□□□□ -1.64
LIMK2P53671 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 AL451139.1-201ENST00000434718 346 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 RPS26P2-201ENST00000440331 348 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 TDGF1P1-201ENST00000445734 527 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 TPT1P13-201ENST00000449760 499 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 HSPE1P22-201ENST00000456856 327 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.82□□□□□ -1.64
LIMK2P53671 EIF2S2P4-201ENST00000461070 984 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK2P53671 PCNAP1-201ENST00000505363 709 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.82□□□□□ -1.64
LIMK2P53671 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.82□□□□□ -1.64
LIMK2P53671 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 BTG4P1-201ENST00000510421 183 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.82□□□□□ -1.64
LIMK2P53671 OR4V1P-201ENST00000525394 1140 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 OR10D4P-201ENST00000525892 951 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AP003168.1-201ENST00000530091 307 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC074029.2-201ENST00000551045 634 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AL049839.1-201ENST00000556151 657 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AC091042.1-201ENST00000579213 173 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 AC073111.2-201ENST00000605657 1075 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 SNORD91B-202ENST00000608459 222 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LIMK2P53671 AC105105.5-201ENST00000622635 1294 ntBASIC4.82□□□□□ -1.64
LIMK2P53671 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.82□□□□□ -1.64
LIMK2P53671 MAPK10-263ENST00000641052 4307 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms