Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.97□□□□□ -1.61
CASP4P49662 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CASP4P49662 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.96□□□□□ -1.61
CASP4P49662 TCP1P3-201ENST00000414406 1498 ntBASIC4.96□□□□□ -1.62
CASP4P49662 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CASP4P49662 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CASP4P49662 AL672167.2-201ENST00000377164 879 ntBASIC4.96□□□□□ -1.62
CASP4P49662 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 SNORA70F-201ENST00000384142 135 ntBASIC4.96□□□□□ -1.62
CASP4P49662 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CASP4P49662 RNA5SP397-201ENST00000391323 118 ntBASIC4.96□□□□□ -1.62
CASP4P49662 MIR937-201ENST00000401271 86 ntBASIC4.96□□□□□ -1.62
CASP4P49662 OR1F12-201ENST00000402365 945 ntBASIC4.96□□□□□ -1.62
CASP4P49662 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 RPL23AP93-201ENST00000440847 484 ntBASIC4.96□□□□□ -1.62
CASP4P49662 AC011753.3-201ENST00000443436 406 ntBASIC4.96□□□□□ -1.62
CASP4P49662 RPL23AP72-201ENST00000492447 435 ntBASIC4.96□□□□□ -1.62
CASP4P49662 MTCO3P42-201ENST00000509488 518 ntBASIC4.96□□□□□ -1.62
CASP4P49662 MTCO3P39-201ENST00000514812 518 ntBASIC4.96□□□□□ -1.62
CASP4P49662 RNA5SP464-201ENST00000516251 108 ntBASIC4.96□□□□□ -1.62
CASP4P49662 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.96□□□□□ -1.62
CASP4P49662 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.96□□□□□ -1.62
CASP4P49662 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.96□□□□□ -1.62
CASP4P49662 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.96□□□□□ -1.62
CASP4P49662 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CASP4P49662 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.96□□□□□ -1.62
CASP4P49662 AC091178.1-203ENST00000584586 279 ntBASIC4.96□□□□□ -1.62
CASP4P49662 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 AC023762.1-201ENST00000603280 584 ntBASIC4.96□□□□□ -1.62
CASP4P49662 AC116651.1-201ENST00000609724 556 ntBASIC4.96□□□□□ -1.62
CASP4P49662 AL159169.2-201ENST00000610061 1269 ntBASIC4.96□□□□□ -1.62
CASP4P49662 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.96□□□□□ -1.62
CASP4P49662 OR2L1P-202ENST00000641567 1023 ntBASIC4.96□□□□□ -1.62
CASP4P49662 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 MFSD8-216ENST00000641147 4009 ntBASIC4.96□□□□□ -1.62
CASP4P49662 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CASP4P49662 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CASP4P49662 AP000542.2-201ENST00000623199 6179 ntBASIC4.96□□□□□ -1.62
CASP4P49662 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CASP4P49662 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
CASP4P49662 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.95□□□□□ -1.62
CASP4P49662 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.95□□□□□ -1.62
CASP4P49662 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 AC079741.1-201ENST00000321498 212 ntBASIC4.95□□□□□ -1.62
CASP4P49662 SNORA71.2-201ENST00000364941 134 ntBASIC4.95□□□□□ -1.62
CASP4P49662 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 MIR195-201ENST00000385194 87 ntBASIC4.95□□□□□ -1.62
CASP4P49662 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.95□□□□□ -1.62
CASP4P49662 RAD23BP1-201ENST00000421404 1227 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AP001324.1-201ENST00000428553 399 ntBASIC4.95□□□□□ -1.62
CASP4P49662 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.95□□□□□ -1.62
CASP4P49662 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.95□□□□□ -1.62
CASP4P49662 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.95□□□□□ -1.62
CASP4P49662 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CASP4P49662 IGKV1-32-201ENST00000519290 311 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AC025857.1-201ENST00000525252 377 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AC137768.1-201ENST00000549998 553 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AC011270.1-201ENST00000558606 583 ntBASIC4.95□□□□□ -1.62
CASP4P49662 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AP001002.1-201ENST00000625148 1513 ntBASIC4.95□□□□□ -1.62
CASP4P49662 AC073429.2-201ENST00000569694 1444 ntBASIC4.95□□□□□ -1.62
CASP4P49662 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.95□□□□□ -1.62
CASP4P49662 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CASP4P49662 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CASP4P49662 CPHL1P-201ENST00000461341 3407 ntBASIC4.94□□□□□ -1.62
CASP4P49662 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 UGT2B26P-201ENST00000508672 1613 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CASP4P49662 Z98755.1-201ENST00000407015 1384 ntBASIC4.94□□□□□ -1.62
CASP4P49662 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 RN7SKP74-201ENST00000362849 309 ntBASIC4.94□□□□□ -1.62
CASP4P49662 SNORD113.2-201ENST00000364166 89 ntBASIC4.94□□□□□ -1.62
CASP4P49662 RNU6-729P-201ENST00000384399 107 ntBASIC4.94□□□□□ -1.62
CASP4P49662 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.94□□□□□ -1.62
CASP4P49662 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CASP4P49662 RNU2-50P-201ENST00000410494 143 ntBASIC4.94□□□□□ -1.62
CASP4P49662 RN7SKP247-201ENST00000411094 308 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.94□□□□□ -1.62
CASP4P49662 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CASP4P49662 AC012519.1-201ENST00000424588 610 ntBASIC4.94□□□□□ -1.62
CASP4P49662 RPEP3-201ENST00000425462 676 ntBASIC4.94□□□□□ -1.62
CASP4P49662 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.94□□□□□ -1.62
CASP4P49662 PPIAP13-201ENST00000434706 478 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms