Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC020890.1-201ENST00000491837 504 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC6A12P48065 RN7SL558P-201ENST00000497468 299 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC6A12P48065 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC6A12P48065 RNA5SP228-201ENST00000516232 133 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC6A12P48065 HIGD1AP18-201ENST00000520730 278 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC6A12P48065 AC107918.3-201ENST00000533272 382 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.72□□□□□ -1.65
SLC6A12P48065 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A12P48065 AL049839.1-201ENST00000556151 657 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC6A12P48065 SNORA74C-1-201ENST00000580726 201 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC005776.1-201ENST00000603164 290 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC011453.2-201ENST00000603737 729 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 BNIP3P19-201ENST00000605397 577 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AL355802.4-201ENST00000607635 548 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 EIF3FP1-201ENST00000613970 806 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC079298.2-201ENST00000623885 459 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 CR381572.2-201ENST00000624852 397 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A12P48065 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
SLC6A12P48065 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A12P48065 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SLC6A12P48065 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A12P48065 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC6A12P48065 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC6A12P48065 CASC19-206ENST00000641028 1430 ntBASIC4.72□□□□□ -1.65
SLC6A12P48065 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC6A12P48065 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.71□□□□□ -1.65
SLC6A12P48065 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.71□□□□□ -1.65
SLC6A12P48065 AC099654.2-201ENST00000433031 1980 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 RNU6-666P-201ENST00000363499 107 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SLC6A12P48065 CHMP1B2P-201ENST00000399581 597 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC6A12P48065 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 RNU2-50P-201ENST00000410494 143 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 VN1R37P-201ENST00000419096 748 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC093162.1-201ENST00000419682 124 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC092905.1-201ENST00000467527 949 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC004453.1-201ENST00000487895 408 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC093890.1-201ENST00000502554 540 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 HMGB1P3-201ENST00000502802 616 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC147055.3-201ENST00000510547 851 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC108120.2-201ENST00000512973 294 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 RNU6-1308P-201ENST00000516817 103 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 RNU6-709P-201ENST00000517257 104 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 OR8A2P-201ENST00000528631 952 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC126365.2-201ENST00000580630 379 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 AL139022.2-201ENST00000606934 443 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AP001521.2-201ENST00000608772 546 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC110792.4-201ENST00000609843 298 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC084824.5-201ENST00000612009 413 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 AC112694.2-201ENST00000623697 768 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
SLC6A12P48065 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 AC017002.4-201ENST00000604721 1525 ntBASIC4.71□□□□□ -1.66
SLC6A12P48065 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC6A12P48065 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC6A12P48065 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms