Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
HTTP42858 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HTTP42858 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HTTP42858 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
HTTP42858 PRDX3P3-201ENST00000447765 522 ntBASIC4.7□□□□□ -1.66
HTTP42858 BTF3P6-201ENST00000448054 499 ntBASIC4.7□□□□□ -1.66
HTTP42858 OR9M1P-201ENST00000459641 921 ntBASIC4.7□□□□□ -1.66
HTTP42858 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.7□□□□□ -1.66
HTTP42858 WBP1LP4-201ENST00000505043 344 ntBASIC4.7□□□□□ -1.66
HTTP42858 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.7□□□□□ -1.66
HTTP42858 AL592182.3-201ENST00000642132 3304 ntBASIC4.7□□□□□ -1.66
HTTP42858 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.7□□□□□ -1.66
HTTP42858 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 AC010329.1-201ENST00000593903 8328 ntBASIC4.7□□□□□ -1.66
HTTP42858 RNU1-83P-201ENST00000363426 164 ntBASIC4.7□□□□□ -1.66
HTTP42858 RN7SKP182-201ENST00000410772 298 ntBASIC4.7□□□□□ -1.66
HTTP42858 OR52E3P-201ENST00000452083 936 ntBASIC4.7□□□□□ -1.66
HTTP42858 YPEL5P3-201ENST00000547227 352 ntBASIC4.7□□□□□ -1.66
HTTP42858 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
HTTP42858 OR8G7P-201ENST00000616658 848 ntBASIC4.7□□□□□ -1.66
HTTP42858 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HTTP42858 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.69□□□□□ -1.66
HTTP42858 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.69□□□□□ -1.66
HTTP42858 AC021660.1-201ENST00000465006 554 ntBASIC4.69□□□□□ -1.66
HTTP42858 RPL6P9-201ENST00000466502 859 ntBASIC4.69□□□□□ -1.66
HTTP42858 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.69□□□□□ -1.66
HTTP42858 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.69□□□□□ -1.66
HTTP42858 MIR6868-201ENST00000611215 58 ntBASIC4.69□□□□□ -1.66
HTTP42858 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.69□□□□□ -1.66
HTTP42858 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.69□□□□□ -1.66
HTTP42858 UBE2CP3-201ENST00000502715 450 ntBASIC4.69□□□□□ -1.66
HTTP42858 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.69□□□□□ -1.66
HTTP42858 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.69□□□□□ -1.66
HTTP42858 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HTTP42858 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HTTP42858 AL034370.1-201ENST00000397254 1590 ntBASIC4.69□□□□□ -1.66
HTTP42858 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 SNORA57.3-201ENST00000411095 141 ntBASIC4.68□□□□□ -1.66
HTTP42858 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.68□□□□□ -1.66
HTTP42858 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.68□□□□□ -1.66
HTTP42858 EIF4HP2-201ENST00000424380 563 ntBASIC4.68□□□□□ -1.66
HTTP42858 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.68□□□□□ -1.66
HTTP42858 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.68□□□□□ -1.66
HTTP42858 AC093166.2-201ENST00000455969 1017 ntBASIC4.68□□□□□ -1.66
HTTP42858 RPL7P9-201ENST00000468715 747 ntBASIC4.68□□□□□ -1.66
HTTP42858 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.68□□□□□ -1.66
HTTP42858 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.68□□□□□ -1.66
HTTP42858 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HTTP42858 RNA5SP432-201ENST00000362480 116 ntBASIC4.68□□□□□ -1.66
HTTP42858 OR5BE1P-201ENST00000425977 939 ntBASIC4.68□□□□□ -1.66
HTTP42858 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.68□□□□□ -1.66
HTTP42858 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 AC010374.1-201ENST00000503762 1237 ntBASIC4.68□□□□□ -1.66
HTTP42858 Z98200.1-201ENST00000607298 470 ntBASIC4.68□□□□□ -1.66
HTTP42858 OR5BE1P-202ENST00000641168 1176 ntBASIC4.68□□□□□ -1.66
HTTP42858 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
HTTP42858 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.68□□□□□ -1.66
HTTP42858 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HTTP42858 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HTTP42858 AC007066.1-201ENST00000392902 381 ntBASIC4.68□□□□□ -1.66
HTTP42858 AL049873.1-201ENST00000480540 376 ntBASIC4.68□□□□□ -1.66
HTTP42858 NDUFA5P2-201ENST00000519723 344 ntBASIC4.68□□□□□ -1.66
HTTP42858 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HTTP42858 AC005034.4-201ENST00000603612 899 ntBASIC4.68□□□□□ -1.66
HTTP42858 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HTTP42858 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HTTP42858 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HTTP42858 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms