Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.21□□□□□ -1.58
HADHAP40939 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.21□□□□□ -1.58
HADHAP40939 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.21□□□□□ -1.58
HADHAP40939 AC024940.3-201ENST00000538551 316 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.21□□□□□ -1.58
HADHAP40939 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AC106785.3-201ENST00000564064 847 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AC011840.5-201ENST00000582125 771 ntBASIC5.21□□□□□ -1.58
HADHAP40939 VN1R84P-201ENST00000593697 235 ntBASIC5.21□□□□□ -1.58
HADHAP40939 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 AC095055.1-201ENST00000603472 1113 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 ELOCP34-201ENST00000604436 327 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AC108359.1-201ENST00000616451 1211 ntBASIC5.21□□□□□ -1.58
HADHAP40939 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 AC018445.2-201ENST00000622987 260 ntBASIC5.21□□□□□ -1.58
HADHAP40939 AL138960.2-201ENST00000625145 535 ntBASIC5.21□□□□□ -1.58
HADHAP40939 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HADHAP40939 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.21□□□□□ -1.58
HADHAP40939 THAP12P5-201ENST00000405864 2275 ntBASIC5.21□□□□□ -1.58
HADHAP40939 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HADHAP40939 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.21□□□□□ -1.58
HADHAP40939 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 CASC19-221ENST00000641309 1382 ntBASIC5.2□□□□□ -1.58
HADHAP40939 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 SNORA74A-201ENST00000364089 198 ntBASIC5.2□□□□□ -1.58
HADHAP40939 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 RNU6-171P-201ENST00000384354 107 ntBASIC5.2□□□□□ -1.58
HADHAP40939 MIR142-201ENST00000384835 87 ntBASIC5.2□□□□□ -1.58
HADHAP40939 MIR600-201ENST00000385007 98 ntBASIC5.2□□□□□ -1.58
HADHAP40939 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 AL390316.1-201ENST00000406279 553 ntBASIC5.2□□□□□ -1.58
HADHAP40939 CTSL3P-202ENST00000412179 788 ntBASIC5.2□□□□□ -1.58
HADHAP40939 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 AL512661.1-201ENST00000434586 1253 ntBASIC5.2□□□□□ -1.58
HADHAP40939 MTND6P18-201ENST00000439477 513 ntBASIC5.2□□□□□ -1.58
HADHAP40939 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 CNOT7P2-201ENST00000441051 832 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.2□□□□□ -1.58
HADHAP40939 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.2□□□□□ -1.58
HADHAP40939 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 MRPL35P2-201ENST00000448009 511 ntBASIC5.2□□□□□ -1.58
HADHAP40939 METTL15P1-201ENST00000481421 1045 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.2□□□□□ -1.58
HADHAP40939 RN7SL727P-201ENST00000482164 296 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC104629.1-201ENST00000494226 508 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC097173.1-201ENST00000505862 819 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC121161.1-201ENST00000510606 652 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC133963.2-201ENST00000513686 578 ntBASIC5.2□□□□□ -1.58
HADHAP40939 HMGN1P15-201ENST00000513870 295 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC105031.1-201ENST00000518550 476 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AP006245.2-201ENST00000522004 300 ntBASIC5.2□□□□□ -1.58
HADHAP40939 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 AC106734.1-201ENST00000568646 663 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 AC090525.3-201ENST00000605601 189 ntBASIC5.2□□□□□ -1.58
HADHAP40939 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 AC112503.2-201ENST00000609005 552 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AL121612.2-201ENST00000612261 482 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AC116447.1-201ENST00000613153 453 ntBASIC5.2□□□□□ -1.58
HADHAP40939 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.2□□□□□ -1.58
HADHAP40939 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.2□□□□□ -1.58
HADHAP40939 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.2□□□□□ -1.58
HADHAP40939 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HADHAP40939 AC073869.10-201ENST00000642016 354 ntBASIC5.2□□□□□ -1.58
HADHAP40939 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HADHAP40939 AC021242.1-201ENST00000507315 2035 ntBASIC5.19□□□□□ -1.58
HADHAP40939 AC011493.1-201ENST00000596753 1632 ntBASIC5.19□□□□□ -1.58
HADHAP40939 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.19□□□□□ -1.58
HADHAP40939 AC100778.3-201ENST00000580060 1750 ntBASIC5.19□□□□□ -1.58
HADHAP40939 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HADHAP40939 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HADHAP40939 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.19□□□□□ -1.58
HADHAP40939 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HADHAP40939 AL592494.2-201ENST00000425455 1548 ntBASIC5.19□□□□□ -1.58
HADHAP40939 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.19□□□□□ -1.58
HADHAP40939 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms