Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.31□□□□□ -1.56
USP8P40818 AC092647.3-201ENST00000443044 633 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.31□□□□□ -1.56
USP8P40818 snoU13.20-201ENST00000459180 104 ntBASIC5.31□□□□□ -1.56
USP8P40818 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 RN7SL629P-201ENST00000489622 285 ntBASIC5.31□□□□□ -1.56
USP8P40818 RNA5SP249-201ENST00000516127 99 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 DYNLL1P4-201ENST00000549314 266 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.31□□□□□ -1.56
USP8P40818 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 MIR4691-201ENST00000583764 85 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.31□□□□□ -1.56
USP8P40818 AC090330.1-201ENST00000588646 764 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC006116.3-201ENST00000592968 361 ntBASIC5.31□□□□□ -1.56
USP8P40818 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 AL671309.1-201ENST00000603750 544 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC011458.1-201ENST00000604034 617 ntBASIC5.31□□□□□ -1.56
USP8P40818 QTRT1P1-201ENST00000604344 1078 ntBASIC5.31□□□□□ -1.56
USP8P40818 AL139022.2-201ENST00000606934 443 ntBASIC5.31□□□□□ -1.56
USP8P40818 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.31□□□□□ -1.56
USP8P40818 AC093799.2-201ENST00000610062 578 ntBASIC5.31□□□□□ -1.56
USP8P40818 AC084824.5-201ENST00000612009 413 ntBASIC5.31□□□□□ -1.56
USP8P40818 AL627230.1-201ENST00000613077 211 ntBASIC5.31□□□□□ -1.56
USP8P40818 AL591926.8-201ENST00000616876 211 ntBASIC5.31□□□□□ -1.56
USP8P40818 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.31□□□□□ -1.56
USP8P40818 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP8P40818 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.31□□□□□ -1.56
USP8P40818 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USP8P40818 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP8P40818 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USP8P40818 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 AC091046.3-201ENST00000631455 1574 ntBASIC5.3□□□□□ -1.56
USP8P40818 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.3□□□□□ -1.56
USP8P40818 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 U8.4-201ENST00000363626 134 ntBASIC5.3□□□□□ -1.56
USP8P40818 RNA5SP428-201ENST00000365129 132 ntBASIC5.3□□□□□ -1.56
USP8P40818 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 AL355143.1-201ENST00000407101 841 ntBASIC5.3□□□□□ -1.56
USP8P40818 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.3□□□□□ -1.56
USP8P40818 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.3□□□□□ -1.56
USP8P40818 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 EEF1B2P5-201ENST00000444820 548 ntBASIC5.3□□□□□ -1.56
USP8P40818 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.3□□□□□ -1.56
USP8P40818 AC005008.1-201ENST00000456151 612 ntBASIC5.3□□□□□ -1.56
USP8P40818 EIF2S2P4-201ENST00000461070 984 ntBASIC5.3□□□□□ -1.56
USP8P40818 RPS17P2-201ENST00000461663 408 ntBASIC5.3□□□□□ -1.56
USP8P40818 BX284632.1-201ENST00000478218 541 ntBASIC5.3□□□□□ -1.56
USP8P40818 AC104629.1-201ENST00000494226 508 ntBASIC5.3□□□□□ -1.56
USP8P40818 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.3□□□□□ -1.56
USP8P40818 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.3□□□□□ -1.56
USP8P40818 HMGB3P13-201ENST00000511263 607 ntBASIC5.3□□□□□ -1.56
USP8P40818 AC027308.1-201ENST00000517993 110 ntBASIC5.3□□□□□ -1.56
USP8P40818 OR7E10P-201ENST00000526420 991 ntBASIC5.3□□□□□ -1.56
USP8P40818 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.3□□□□□ -1.56
USP8P40818 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.3□□□□□ -1.56
USP8P40818 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.3□□□□□ -1.56
USP8P40818 AC027281.1-201ENST00000574178 758 ntBASIC5.3□□□□□ -1.56
USP8P40818 AL355802.4-201ENST00000607635 548 ntBASIC5.3□□□□□ -1.56
USP8P40818 AC084036.1-201ENST00000609190 508 ntBASIC5.3□□□□□ -1.56
USP8P40818 EIF3FP1-201ENST00000613970 806 ntBASIC5.3□□□□□ -1.56
USP8P40818 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.3□□□□□ -1.56
USP8P40818 LINC01739-205ENST00000641890 573 ntBASIC5.3□□□□□ -1.56
USP8P40818 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.3□□□□□ -1.56
USP8P40818 DDX6P1-205ENST00000441966 1436 ntBASIC5.3□□□□□ -1.56
USP8P40818 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP8P40818 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.3□□□□□ -1.56
USP8P40818 AC027290.2-201ENST00000623210 18662 ntBASIC5.3□□□□□ -1.56
USP8P40818 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.3□□□□□ -1.56
USP8P40818 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.3□□□□□ -1.56
USP8P40818 DDX18P3-201ENST00000404856 2007 ntBASIC5.3□□□□□ -1.56
USP8P40818 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
USP8P40818 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
USP8P40818 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP8P40818 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP8P40818 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP8P40818 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
USP8P40818 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
USP8P40818 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms