Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC015983.1-201ENST00000441577 373 ntBASIC7.34□□□□□ -1.23
RXRBP28702 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RXRBP28702 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.34□□□□□ -1.23
RXRBP28702 RHEBP2-201ENST00000450289 600 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC092647.2-201ENST00000452998 253 ntBASIC7.34□□□□□ -1.23
RXRBP28702 Z95152.1-201ENST00000453556 656 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC112187.1-201ENST00000455837 479 ntBASIC7.34□□□□□ -1.23
RXRBP28702 OR11I1P-201ENST00000486033 954 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC068724.1-201ENST00000487100 792 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.34□□□□□ -1.23
RXRBP28702 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RXRBP28702 RPS4XP20-201ENST00000505751 772 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.34□□□□□ -1.23
RXRBP28702 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RXRBP28702 AC021006.3-201ENST00000530771 192 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC009643.1-201ENST00000532030 391 ntBASIC7.34□□□□□ -1.23
RXRBP28702 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.34□□□□□ -1.23
RXRBP28702 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.34□□□□□ -1.23
RXRBP28702 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC7.34□□□□□ -1.23
RXRBP28702 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.34□□□□□ -1.23
RXRBP28702 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.34□□□□□ -1.23
RXRBP28702 AC002400.1-201ENST00000569310 726 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 MIR4675-201ENST00000577898 77 ntBASIC7.34□□□□□ -1.23
RXRBP28702 DUXAP11-201ENST00000603858 526 ntBASIC7.34□□□□□ -1.23
RXRBP28702 HMGB1P51-201ENST00000605166 638 ntBASIC7.34□□□□□ -1.23
RXRBP28702 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 AL359757.1-201ENST00000623176 255 ntBASIC7.34□□□□□ -1.23
RXRBP28702 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RXRBP28702 THAP12P9-201ENST00000503971 2360 ntBASIC7.34□□□□□ -1.23
RXRBP28702 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.34□□□□□ -1.23
RXRBP28702 AC112243.1-201ENST00000623949 3851 ntBASIC7.34□□□□□ -1.23
RXRBP28702 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.34□□□□□ -1.23
RXRBP28702 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RXRBP28702 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.34□□□□□ -1.24
RXRBP28702 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.24
RXRBP28702 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.33□□□□□ -1.24
RXRBP28702 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 PABPC1P8-201ENST00000452851 2086 ntBASIC7.33□□□□□ -1.24
RXRBP28702 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 RNU6-797P-201ENST00000363101 109 ntBASIC7.33□□□□□ -1.24
RXRBP28702 RNU4-51P-201ENST00000364206 140 ntBASIC7.33□□□□□ -1.24
RXRBP28702 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RXRBP28702 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 MTCO1P45-201ENST00000431457 267 ntBASIC7.33□□□□□ -1.24
RXRBP28702 BX119904.1-201ENST00000432026 348 ntBASIC7.33□□□□□ -1.24
RXRBP28702 OR13K1P-201ENST00000444577 975 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 RNU1-88P-201ENST00000459274 128 ntBASIC7.33□□□□□ -1.24
RXRBP28702 RPL9P33-201ENST00000484311 566 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC079203.1-201ENST00000487972 404 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 AC093770.1-201ENST00000511559 571 ntBASIC7.33□□□□□ -1.24
RXRBP28702 RN7SKP122-201ENST00000515923 296 ntBASIC7.33□□□□□ -1.24
RXRBP28702 MIR2117-201ENST00000516780 80 ntBASIC7.33□□□□□ -1.24
RXRBP28702 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.33□□□□□ -1.24
RXRBP28702 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 NDUFS5P6-201ENST00000529136 295 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
RXRBP28702 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.33□□□□□ -1.24
RXRBP28702 NMNAT1P5-201ENST00000559657 841 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC007494.1-201ENST00000562293 760 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AC074051.3-201ENST00000570238 358 ntBASIC7.33□□□□□ -1.24
RXRBP28702 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.33□□□□□ -1.24
RXRBP28702 AC016877.3-201ENST00000606778 504 ntBASIC7.33□□□□□ -1.24
RXRBP28702 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.33□□□□□ -1.24
RXRBP28702 AC009509.4-201ENST00000619202 509 ntBASIC7.33□□□□□ -1.24
RXRBP28702 FP325313.1-201ENST00000638228 703 ntBASIC7.33□□□□□ -1.24
RXRBP28702 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.33□□□□□ -1.24
RXRBP28702 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 OR52B5P-204ENST00000641744 3467 ntBASIC7.33□□□□□ -1.24
RXRBP28702 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RXRBP28702 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.33□□□□□ -1.24
RXRBP28702 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms