Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP24386 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP24386 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.03□□□□□ -1.6
CHMP24386 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP24386 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CHMP24386 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP24386 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP24386 AC022031.1-201ENST00000585985 2593 ntBASIC5.03□□□□□ -1.6
CHMP24386 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CHMP24386 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHMP24386 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 OR1L6-202ENST00000373684 1044 ntBASIC5.02□□□□□ -1.61
CHMP24386 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 RPL19P16-201ENST00000433839 588 ntBASIC5.02□□□□□ -1.61
CHMP24386 OR6D1P-201ENST00000436165 939 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC012075.1-201ENST00000436549 580 ntBASIC5.02□□□□□ -1.61
CHMP24386 ELOCP11-201ENST00000436690 332 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.02□□□□□ -1.61
CHMP24386 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC000041.1-201ENST00000439655 175 ntBASIC5.02□□□□□ -1.61
CHMP24386 UBE2V1P5-201ENST00000440070 405 ntBASIC5.02□□□□□ -1.61
CHMP24386 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC019185.1-201ENST00000442718 389 ntBASIC5.02□□□□□ -1.61
CHMP24386 ELOCP16-201ENST00000444494 332 ntBASIC5.02□□□□□ -1.61
CHMP24386 TRY2P-201ENST00000448860 689 ntBASIC5.02□□□□□ -1.61
CHMP24386 PRPF38AP1-201ENST00000451976 933 ntBASIC5.02□□□□□ -1.61
CHMP24386 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 AL133445.1-201ENST00000467051 452 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
CHMP24386 OR2AO1P-201ENST00000476497 403 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.02□□□□□ -1.61
CHMP24386 AC093801.2-201ENST00000503966 1050 ntBASIC5.02□□□□□ -1.61
CHMP24386 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 EIF3KP3-201ENST00000514461 639 ntBASIC5.02□□□□□ -1.61
CHMP24386 HMGN1P9-201ENST00000515212 298 ntBASIC5.02□□□□□ -1.61
CHMP24386 SCARNA20.4-201ENST00000516969 131 ntBASIC5.02□□□□□ -1.61
CHMP24386 CDC42P3-201ENST00000518493 633 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP24386 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.02□□□□□ -1.61
CHMP24386 AC127024.5-201ENST00000580085 462 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC233702.9-201ENST00000581528 203 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP24386 SUMO2P15-201ENST00000604285 278 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC124016.2-201ENST00000610058 665 ntBASIC5.02□□□□□ -1.61
CHMP24386 MIR6837-201ENST00000620884 64 ntBASIC5.02□□□□□ -1.61
CHMP24386 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 SAMMSON-227ENST00000642114 1199 ntBASIC5.02□□□□□ -1.61
CHMP24386 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CHMP24386 RARSP1-201ENST00000542842 1418 ntBASIC5.02□□□□□ -1.61
CHMP24386 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CHMP24386 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CHMP24386 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP24386 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP24386 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.01□□□□□ -1.61
CHMP24386 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.01□□□□□ -1.61
CHMP24386 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP24386 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CHMP24386 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CHMP24386 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 CYP1D1P-201ENST00000416662 1433 ntBASIC5.01□□□□□ -1.61
CHMP24386 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 OR9K1P-201ENST00000326513 941 ntBASIC5.01□□□□□ -1.61
CHMP24386 RNU5B-1-201ENST00000363286 116 ntBASIC5.01□□□□□ -1.61
CHMP24386 RNA5SP223-201ENST00000365174 120 ntBASIC5.01□□□□□ -1.61
CHMP24386 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.01□□□□□ -1.61
CHMP24386 NPM1P4-201ENST00000414095 812 ntBASIC5.01□□□□□ -1.61
CHMP24386 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.01□□□□□ -1.61
CHMP24386 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP24386 OR5AW1P-201ENST00000426334 1006 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms