Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 SNORA58B-201ENST00000364259 136 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 RNU6-185P-201ENST00000384421 107 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AL589647.1-201ENST00000402485 466 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC013404.1-201ENST00000413068 249 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AL160175.1-201ENST00000428124 247 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC239809.1-201ENST00000450470 217 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC116562.1-201ENST00000485355 781 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC093270.2-201ENST00000486157 792 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC140172.1-201ENST00000502928 141 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC021483.2-201ENST00000567415 758 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AP005262.1-201ENST00000582646 997 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 MIR548Y-201ENST00000582739 110 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 MIR4443-201ENST00000585052 53 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC090510.2-201ENST00000617465 629 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.97□□□□□ -1.61
HLA-DPA1P20036 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPA1P20036 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPA1P20036 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DPA1P20036 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AL121878.1-201ENST00000418638 859 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC006455.6-201ENST00000426192 893 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 MTCO1P52-201ENST00000433928 531 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AL357520.1-201ENST00000441557 453 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC107398.1-201ENST00000486904 505 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 RPL37AP8-201ENST00000494116 276 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 NPM1P6-201ENST00000521088 871 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC005868.1-201ENST00000536421 331 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC079791.1-201ENST00000605356 973 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AL008729.2-201ENST00000606393 473 ntBASIC4.96□□□□□ -1.62
HLA-DPA1P20036 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DPA1P20036 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 DDX18P4-201ENST00000511690 1966 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 OR13Z1P-201ENST00000416141 834 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 RBMY2QP-201ENST00000429799 1147 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 TRIM60P13-201ENST00000432350 1283 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC012512.1-201ENST00000446594 718 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AC000111.2-201ENST00000448200 210 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 HMGB1P5-202ENST00000451497 985 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 RN7SL826P-201ENST00000479724 288 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 NDUFA5P12-201ENST00000503796 343 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 MTCO1P31-201ENST00000506355 492 ntBASIC4.95□□□□□ -1.62
HLA-DPA1P20036 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DPA1P20036 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms