Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 U3.10-201ENST00000364459 214 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 RNU6-1119P-201ENST00000384349 108 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 RNU6-253P-201ENST00000384730 105 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 RPL11P3-201ENST00000395256 523 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 RN7SKP279-201ENST00000411383 298 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 FCF1P9-201ENST00000412546 282 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 NMD3P2-201ENST00000421815 761 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL6A2P12110 MTATP6P13-201ENST00000438531 667 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AL357520.1-201ENST00000441557 453 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC097359.1-201ENST00000447946 463 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 FRG2FP-204ENST00000453982 852 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC005165.2-201ENST00000466070 380 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC090602.1-201ENST00000469695 252 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC116337.2-201ENST00000477662 156 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC011825.1-201ENST00000484967 388 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 RN7SL284P-201ENST00000498823 275 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 AC097486.1-201ENST00000515331 210 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 SMARCE1P4-201ENST00000523647 241 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC019322.1-201ENST00000571869 389 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.91□□□□□ -1.46
COL6A2P12110 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 U73023.1-201ENST00000603134 700 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AC092354.1-201ENST00000606057 376 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AL031775.1-201ENST00000607014 887 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AL133481.2-203ENST00000607558 139 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.91□□□□□ -1.46
COL6A2P12110 AL445670.1-201ENST00000618889 801 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 AL160394.1-201ENST00000624765 724 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 AL359955.1-201ENST00000455242 3275 ntBASIC5.91□□□□□ -1.46
COL6A2P12110 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL6A2P12110 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL6A2P12110 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL6A2P12110 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 AL137141.1-201ENST00000624622 4836 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL6A2P12110 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL6A2P12110 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 SNORA21-201ENST00000362423 132 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 MIR191-201ENST00000384873 92 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 MIR320B1-201ENST00000390209 79 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL6A2P12110 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 TPMTP3-201ENST00000411928 735 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 CEACAMP8-201ENST00000413902 580 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AL161449.1-201ENST00000414531 1199 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.9□□□□□ -1.46
COL6A2P12110 AL354766.1-201ENST00000423396 542 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC099677.3-201ENST00000427081 395 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC008072.1-201ENST00000434254 824 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC096775.1-201ENST00000437724 448 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 ARMC4P1-201ENST00000438905 707 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC093155.1-201ENST00000440164 826 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.9□□□□□ -1.46
COL6A2P12110 AL137845.2-201ENST00000444292 988 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 IGBP1P3-201ENST00000447449 1000 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.9□□□□□ -1.46
COL6A2P12110 AC002553.3-201ENST00000453002 341 ntBASIC5.9□□□□□ -1.46
COL6A2P12110 AC104164.1-201ENST00000460282 590 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms