Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC6P09630 C1DP3-201ENST00000455013 423 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 AC020898.1-201ENST00000474167 787 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC6P09630 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC6P09630 AP001372.4-201ENST00000524889 472 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC6P09630 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC6P09630 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC6P09630 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC6P09630 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC6P09630 AC015911.5-201ENST00000587076 451 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC6P09630 LSM1P2-201ENST00000604911 322 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 AL158050.2-201ENST00000605336 568 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 AC092653.1-201ENST00000608509 531 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.47□□□□□ -1.53
HOXC6P09630 AF129408.1-201ENST00000608767 431 ntBASIC5.47□□□□□ -1.53
HOXC6P09630 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC6P09630 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC6P09630 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC6P09630 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.47□□□□□ -1.53
HOXC6P09630 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC6P09630 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC6P09630 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC6P09630 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HOXC6P09630 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC6P09630 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC6P09630 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXC6P09630 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 AL442639.1-201ENST00000625030 1899 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 IGKV7-3-201ENST00000357453 298 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 RNA5SP479-201ENST00000364858 117 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 AC073508.1-201ENST00000428866 656 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 MTND4LP14-201ENST00000429447 288 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC6P09630 AC011242.1-201ENST00000433596 1158 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 HMGN1P5-201ENST00000448591 263 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 MTATP6P14-201ENST00000455189 673 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 MTND2P28-201ENST00000457540 1044 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 AC073358.1-201ENST00000505671 684 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC6P09630 RNU1-6P-201ENST00000516290 144 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC100784.1-201ENST00000522790 310 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 AL049839.1-201ENST00000556151 657 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 AC116553.2-201ENST00000564203 463 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC084783.1-201ENST00000565846 910 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC107993.1-201ENST00000591343 684 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC103792.1-201ENST00000603591 919 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 MIR6716-201ENST00000613413 80 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AL445493.3-201ENST00000619568 477 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AC068724.3-201ENST00000625906 87 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AL356118.1-201ENST00000635272 1078 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 AP005432.1-201ENST00000580891 3485 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXC6P09630 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC6P09630 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 AC108751.5-201ENST00000492880 1336 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC6P09630 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 AL450345.1-202ENST00000605741 3881 ntBASIC5.46□□□□□ -1.54
HOXC6P09630 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HOXC6P09630 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC6P09630 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC6P09630 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 TRIM51GP-201ENST00000534741 1350 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC6P09630 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC6P09630 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HOXC6P09630 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC6P09630 Y_RNA.126-201ENST00000363382 111 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC6P09630 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 AL356057.1-202ENST00000402263 756 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC6P09630 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 UQCRBP1-201ENST00000421129 336 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC6P09630 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
HOXC6P09630 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms