Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.34□□□□□ -1.71
P04436 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P04436 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P04436 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
P04436 ZFRP1-201ENST00000457579 2970 ntBASIC4.34□□□□□ -1.71
P04436 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
P04436 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.71
P04436 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.34□□□□□ -1.71
P04436 AC079741.1-201ENST00000321498 212 ntBASIC4.34□□□□□ -1.71
P04436 SNORA71.2-201ENST00000364941 134 ntBASIC4.34□□□□□ -1.71
P04436 RNU6-398P-201ENST00000384143 109 ntBASIC4.34□□□□□ -1.71
P04436 Z98745.1-201ENST00000402553 494 ntBASIC4.34□□□□□ -1.71
P04436 RPA2P2-201ENST00000419698 796 ntBASIC4.34□□□□□ -1.71
P04436 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.34□□□□□ -1.71
P04436 AL359265.2-201ENST00000434367 631 ntBASIC4.34□□□□□ -1.71
P04436 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 H2AFZP5-201ENST00000446960 382 ntBASIC4.34□□□□□ -1.71
P04436 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 TPT1P13-201ENST00000449760 499 ntBASIC4.34□□□□□ -1.71
P04436 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
P04436 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
P04436 IGLV2-34-201ENST00000490007 283 ntBASIC4.34□□□□□ -1.71
P04436 ATG10-AS1-201ENST00000504846 648 ntBASIC4.34□□□□□ -1.71
P04436 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.34□□□□□ -1.71
P04436 RNA5SP249-201ENST00000516127 99 ntBASIC4.34□□□□□ -1.71
P04436 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 OR5AN2P-201ENST00000534535 896 ntBASIC4.34□□□□□ -1.71
P04436 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.34□□□□□ -1.71
P04436 AL110118.1-201ENST00000553543 400 ntBASIC4.34□□□□□ -1.71
P04436 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.34□□□□□ -1.71
P04436 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.34□□□□□ -1.71
P04436 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
P04436 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.34□□□□□ -1.71
P04436 AC093249.4-201ENST00000564755 259 ntBASIC4.34□□□□□ -1.71
P04436 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.34□□□□□ -1.71
P04436 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.34□□□□□ -1.71
P04436 AC010928.1-201ENST00000592477 1447 ntBASIC4.34□□□□□ -1.71
P04436 AC092079.1-201ENST00000558620 1985 ntBASIC4.34□□□□□ -1.71
P04436 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
P04436 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
P04436 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.34□□□□□ -1.72
P04436 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.33□□□□□ -1.72
P04436 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.33□□□□□ -1.72
P04436 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
P04436 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.33□□□□□ -1.72
P04436 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.33□□□□□ -1.72
P04436 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 RNA5SP443-201ENST00000363083 132 ntBASIC4.33□□□□□ -1.72
P04436 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P04436 SNORA68.2-201ENST00000391263 128 ntBASIC4.33□□□□□ -1.72
P04436 AL139039.2-201ENST00000407436 479 ntBASIC4.33□□□□□ -1.72
P04436 AC009302.1-201ENST00000417147 390 ntBASIC4.33□□□□□ -1.72
P04436 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 MTCYBP29-201ENST00000436327 1006 ntBASIC4.33□□□□□ -1.72
P04436 TCEA1P3-201ENST00000443005 880 ntBASIC4.33□□□□□ -1.72
P04436 CASP3P1-201ENST00000446037 609 ntBASIC4.33□□□□□ -1.72
P04436 AL157385.1-201ENST00000446973 268 ntBASIC4.33□□□□□ -1.72
P04436 AC243772.1-201ENST00000451620 410 ntBASIC4.33□□□□□ -1.72
P04436 AC079168.2-201ENST00000453977 416 ntBASIC4.33□□□□□ -1.72
P04436 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 AC096741.1-201ENST00000472250 846 ntBASIC4.33□□□□□ -1.72
P04436 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 HMGB3P14-201ENST00000494195 599 ntBASIC4.33□□□□□ -1.72
P04436 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P04436 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.33□□□□□ -1.72
P04436 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
P04436 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.33□□□□□ -1.72
P04436 LSM3P2-201ENST00000551246 273 ntBASIC4.33□□□□□ -1.72
P04436 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.33□□□□□ -1.72
P04436 MTATP6P25-201ENST00000574491 261 ntBASIC4.33□□□□□ -1.72
P04436 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.33□□□□□ -1.72
P04436 AC234771.5-201ENST00000600161 514 ntBASIC4.33□□□□□ -1.72
P04436 AC084373.1-201ENST00000603311 235 ntBASIC4.33□□□□□ -1.72
P04436 AC073137.1-201ENST00000605636 634 ntBASIC4.33□□□□□ -1.72
P04436 AL133406.3-201ENST00000606817 541 ntBASIC4.33□□□□□ -1.72
P04436 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
P04436 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.33□□□□□ -1.72
P04436 AC011755.1-201ENST00000623763 2049 ntBASIC4.33□□□□□ -1.72
P04436 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
P04436 CASC19-284ENST00000642142 1868 ntBASIC4.32□□□□□ -1.72
P04436 BX005019.1-201ENST00000561881 1810 ntBASIC4.32□□□□□ -1.72
P04436 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms