Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK1BO75841 SNORA67-201ENST00000384423 137 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RNU1-77P-201ENST00000390868 162 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK1BO75841 RNA5SP231-201ENST00000410496 138 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RN7SKP206-201ENST00000410823 293 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AF186996.5-201ENST00000418098 904 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK1BO75841 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1BO75841 RPL23AP89-201ENST00000439324 255 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AL390119.1-201ENST00000440329 312 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC064862.5-201ENST00000440618 334 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK1BO75841 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 VN1R32P-201ENST00000452234 905 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RPL7P45-201ENST00000455851 743 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 AC006517.1-201ENST00000480485 328 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RN7SL809P-201ENST00000482040 297 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 EIF1P7-201ENST00000487533 337 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 RNU6-319P-201ENST00000516025 108 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RN7SKP260-201ENST00000516907 149 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.91□□□□□ -1.78
UPK1BO75841 AC126177.5-201ENST00000549599 178 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC079600.1-201ENST00000550326 297 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.91□□□□□ -1.78
UPK1BO75841 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK1BO75841 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1BO75841 MIR6883-201ENST00000614952 78 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 RMST_5.1-201ENST00000618704 126 ntBASIC3.91□□□□□ -1.78
UPK1BO75841 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
UPK1BO75841 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK1BO75841 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
UPK1BO75841 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
UPK1BO75841 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPK1BO75841 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
UPK1BO75841 USP9YP4-201ENST00000424401 1745 ntBASIC3.9□□□□□ -1.78
UPK1BO75841 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.9□□□□□ -1.78
UPK1BO75841 AC139769.1-204ENST00000472297 1931 ntBASIC3.9□□□□□ -1.78
UPK1BO75841 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.9□□□□□ -1.78
UPK1BO75841 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1BO75841 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1BO75841 BPHL-201ENST00000380368 797 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 AL034403.1-201ENST00000399414 885 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 HSPD1P16-201ENST00000402302 394 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 NCSTNP1-201ENST00000406229 144 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 SNORA3C-201ENST00000408792 125 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.9□□□□□ -1.79
UPK1BO75841 USP12PY-201ENST00000427677 1064 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC093716.1-201ENST00000435923 377 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK1BO75841 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1BO75841 AMYP1-201ENST00000440059 1023 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 FHP1-201ENST00000442741 703 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 YWHAQP9-201ENST00000445891 512 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC093166.3-201ENST00000448785 303 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC079168.2-201ENST00000453977 416 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 ISCUP1-201ENST00000454451 448 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 RPL31P53-201ENST00000457065 348 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK1BO75841 RPL29P23-201ENST00000486188 442 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC3.9□□□□□ -1.79
UPK1BO75841 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1BO75841 MTCO3P42-201ENST00000509488 518 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 COX6B1P5-201ENST00000509843 249 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 AC018797.3-201ENST00000513388 1241 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 MTCO3P39-201ENST00000514812 518 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 RNA5SP143-201ENST00000516936 115 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1BO75841 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1BO75841 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC3.9□□□□□ -1.79
UPK1BO75841 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK1BO75841 MIR1273E-201ENST00000581165 102 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1BO75841 AC009303.3-201ENST00000591103 736 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AL160290.3-201ENST00000604869 165 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 Z98200.1-201ENST00000607298 470 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC019278.1-201ENST00000623516 479 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AC138907.10-201ENST00000623708 983 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK1BO75841 HSPA8P1-201ENST00000425843 1833 ntBASIC3.9□□□□□ -1.79
UPK1BO75841 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK1BO75841 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
UPK1BO75841 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
UPK1BO75841 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms