Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 Y_RNA.301-201ENST00000364990 103 ntBASIC7.82□□□□□ -1.16
RNF40O75150 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
RNF40O75150 SNORA68-201ENST00000384437 133 ntBASIC7.82□□□□□ -1.16
RNF40O75150 SNORA70I-201ENST00000384544 135 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC113608.1-201ENST00000398740 305 ntBASIC7.82□□□□□ -1.16
RNF40O75150 Y_RNA.615-201ENST00000410769 117 ntBASIC7.82□□□□□ -1.16
RNF40O75150 PPIAP30-201ENST00000415473 519 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC092634.6-201ENST00000418558 192 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.82□□□□□ -1.16
RNF40O75150 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AC099344.1-201ENST00000433548 492 ntBASIC7.82□□□□□ -1.16
RNF40O75150 SUMO2P8-201ENST00000434672 286 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 VN1R6P-201ENST00000458417 907 ntBASIC7.82□□□□□ -1.16
RNF40O75150 RPS4XP10-201ENST00000465034 731 ntBASIC7.82□□□□□ -1.16
RNF40O75150 RN7SL751P-201ENST00000473281 284 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC079080.1-201ENST00000479841 822 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC068781.1-201ENST00000488231 618 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AC016559.1-201ENST00000511420 199 ntBASIC7.82□□□□□ -1.16
RNF40O75150 OR52H2P-201ENST00000514607 902 ntBASIC7.82□□□□□ -1.16
RNF40O75150 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF40O75150 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.82□□□□□ -1.16
RNF40O75150 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.82□□□□□ -1.16
RNF40O75150 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.82□□□□□ -1.16
RNF40O75150 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.82□□□□□ -1.16
RNF40O75150 AC018462.2-201ENST00000605375 395 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AL008723.3-201ENST00000608926 449 ntBASIC7.82□□□□□ -1.16
RNF40O75150 AC004696.1-201ENST00000614345 607 ntBASIC7.82□□□□□ -1.16
RNF40O75150 uc_338.15-201ENST00000615470 191 ntBASIC7.82□□□□□ -1.16
RNF40O75150 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.82□□□□□ -1.16
RNF40O75150 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.82□□□□□ -1.16
RNF40O75150 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 AL590065.1-201ENST00000603371 4774 ntBASIC7.82□□□□□ -1.16
RNF40O75150 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 AP004289.1-201ENST00000436307 2205 ntBASIC7.82□□□□□ -1.16
RNF40O75150 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
RNF40O75150 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF40O75150 AC079178.2-201ENST00000439323 1624 ntBASIC7.81□□□□□ -1.16
RNF40O75150 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 LINC02128-205ENST00000641755 1334 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC127070.3-201ENST00000503695 3263 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC091544.5-201ENST00000620192 3815 ntBASIC7.81□□□□□ -1.16
RNF40O75150 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
RNF40O75150 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 AC095038.1-201ENST00000429248 1591 ntBASIC7.81□□□□□ -1.16
RNF40O75150 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 KYNUP1-201ENST00000466683 1406 ntBASIC7.81□□□□□ -1.16
RNF40O75150 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 RNU5E-1-201ENST00000362477 120 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AL139327.1-201ENST00000382988 348 ntBASIC7.81□□□□□ -1.16
RNF40O75150 RNU6-26P-201ENST00000383985 107 ntBASIC7.81□□□□□ -1.16
RNF40O75150 Y_RNA.574-201ENST00000384766 95 ntBASIC7.81□□□□□ -1.16
RNF40O75150 MIR506-201ENST00000384998 124 ntBASIC7.81□□□□□ -1.16
RNF40O75150 MIR514A2-201ENST00000385131 88 ntBASIC7.81□□□□□ -1.16
RNF40O75150 MIR514A3-201ENST00000385132 88 ntBASIC7.81□□□□□ -1.16
RNF40O75150 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RNF40O75150 TMSB4XP8-201ENST00000402089 135 ntBASIC7.81□□□□□ -1.16
RNF40O75150 MRPL42P2-201ENST00000403169 426 ntBASIC7.81□□□□□ -1.16
RNF40O75150 RN7SKP137-201ENST00000411074 307 ntBASIC7.81□□□□□ -1.16
RNF40O75150 RNU6-1304P-201ENST00000411374 106 ntBASIC7.81□□□□□ -1.16
RNF40O75150 TMSB4XP6-201ENST00000415187 135 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC023141.10-201ENST00000415634 200 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC127526.1-201ENST00000417526 366 ntBASIC7.81□□□□□ -1.16
RNF40O75150 TMSB4XP1-201ENST00000424567 135 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 AL356276.2-201ENST00000435919 558 ntBASIC7.81□□□□□ -1.16
RNF40O75150 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.81□□□□□ -1.16
RNF40O75150 APOOP2-201ENST00000461561 539 ntBASIC7.81□□□□□ -1.16
RNF40O75150 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 RN7SL153P-201ENST00000486501 292 ntBASIC7.81□□□□□ -1.16
RNF40O75150 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.81□□□□□ -1.16
RNF40O75150 RN7SL388P-201ENST00000498736 339 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AL445187.1-201ENST00000502685 260 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC131392.1-201ENST00000506490 633 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms