Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 FAM35DP-201ENST00000323387 2712 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SHOX2O60902 U3.2-201ENST00000362981 210 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 RNU1-63P-201ENST00000383902 164 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.62□□□□□ -1.67
SHOX2O60902 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.62□□□□□ -1.67
SHOX2O60902 PTMAP6-201ENST00000439110 327 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.62□□□□□ -1.67
SHOX2O60902 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.62□□□□□ -1.67
SHOX2O60902 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.62□□□□□ -1.67
SHOX2O60902 AC092905.1-201ENST00000467527 949 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.62□□□□□ -1.67
SHOX2O60902 RNA5SP362-201ENST00000516048 118 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 RNA5SP43-201ENST00000516559 110 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.62□□□□□ -1.67
SHOX2O60902 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.62□□□□□ -1.67
SHOX2O60902 AC012603.1-201ENST00000606424 528 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 AL353662.3-201ENST00000625131 237 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.62□□□□□ -1.67
SHOX2O60902 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.62□□□□□ -1.67
SHOX2O60902 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHOX2O60902 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 AL589647.1-201ENST00000402485 466 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 OR3A2-201ENST00000408891 1076 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC062016.2-201ENST00000420950 676 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC239798.3-201ENST00000454459 408 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC091685.2-201ENST00000454924 864 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 PGAM1P13-201ENST00000507497 754 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.61□□□□□ -1.67
SHOX2O60902 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 RPL23AP97-201ENST00000568955 471 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
SHOX2O60902 MIR4697-201ENST00000582977 78 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.61□□□□□ -1.67
SHOX2O60902 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC079395.2-201ENST00000610982 737 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 AP002505.2-201ENST00000623585 696 ntBASIC4.61□□□□□ -1.67
SHOX2O60902 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SHOX2O60902 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHOX2O60902 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHOX2O60902 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHOX2O60902 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHOX2O60902 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.61□□□□□ -1.67
SHOX2O60902 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHOX2O60902 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHOX2O60902 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 AC103591.2-201ENST00000265259 766 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHOX2O60902 RNA5SP388-201ENST00000362584 119 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 RN7SKP126-201ENST00000411143 300 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.6□□□□□ -1.67
SHOX2O60902 TRIM60P17-201ENST00000415181 719 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 RPS23P10-201ENST00000416185 486 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.6□□□□□ -1.67
SHOX2O60902 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.6□□□□□ -1.67
SHOX2O60902 HMGB1P32-201ENST00000425971 565 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.6□□□□□ -1.67
SHOX2O60902 RN7SL329P-201ENST00000467740 299 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 UBA52P7-201ENST00000486088 380 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC025554.1-201ENST00000505641 188 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 OR5M14P-201ENST00000506803 618 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.6□□□□□ -1.67
SHOX2O60902 RNA5SP228-201ENST00000516232 133 ntBASIC4.6□□□□□ -1.67
SHOX2O60902 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.6□□□□□ -1.67
SHOX2O60902 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.6□□□□□ -1.67
SHOX2O60902 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.6□□□□□ -1.67
SHOX2O60902 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.6□□□□□ -1.67
SHOX2O60902 RN7SL802P-201ENST00000577858 299 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms