Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 RPL7AP6-201ENST00000477943 801 ntBASIC5.06□□□□□ -1.6
LDB2O43679 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 AC010350.1-201ENST00000504908 231 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC133963.2-201ENST00000513686 578 ntBASIC5.06□□□□□ -1.6
LDB2O43679 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 AP001804.2-201ENST00000533932 910 ntBASIC5.06□□□□□ -1.6
LDB2O43679 OR8K4P-201ENST00000534608 872 ntBASIC5.06□□□□□ -1.6
LDB2O43679 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.06□□□□□ -1.6
LDB2O43679 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.06□□□□□ -1.6
LDB2O43679 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.06□□□□□ -1.6
LDB2O43679 AC010735.1-201ENST00000567305 1026 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC106734.1-201ENST00000568646 663 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC010503.3-201ENST00000594355 540 ntBASIC5.06□□□□□ -1.6
LDB2O43679 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LDB2O43679 AC105254.2-201ENST00000603636 436 ntBASIC5.06□□□□□ -1.6
LDB2O43679 TAS2R6P-201ENST00000605022 826 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC067838.1-201ENST00000606064 577 ntBASIC5.06□□□□□ -1.6
LDB2O43679 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 AC009163.6-201ENST00000612367 342 ntBASIC5.06□□□□□ -1.6
LDB2O43679 AC083865.1-201ENST00000636634 831 ntBASIC5.06□□□□□ -1.6
LDB2O43679 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LDB2O43679 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LDB2O43679 SCARNA15-201ENST00000607520 4325 ntBASIC5.06□□□□□ -1.6
LDB2O43679 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
LDB2O43679 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 AP002784.2-201ENST00000397300 549 ntBASIC5.05□□□□□ -1.6
LDB2O43679 MIR937-201ENST00000401271 86 ntBASIC5.05□□□□□ -1.6
LDB2O43679 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.05□□□□□ -1.6
LDB2O43679 RPS26P13-201ENST00000419030 330 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 HMGN2P27-201ENST00000427352 270 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 ARF4P4-201ENST00000439608 520 ntBASIC5.05□□□□□ -1.6
LDB2O43679 MED6P1-201ENST00000439659 713 ntBASIC5.05□□□□□ -1.6
LDB2O43679 TCEA1P3-201ENST00000443005 880 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL354714.3-201ENST00000447284 493 ntBASIC5.05□□□□□ -1.6
LDB2O43679 EXOSC3P1-201ENST00000448649 500 ntBASIC5.05□□□□□ -1.6
LDB2O43679 IGHV5-78-201ENST00000450948 295 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL645937.3-201ENST00000453647 936 ntBASIC5.05□□□□□ -1.6
LDB2O43679 SEPT7P3-201ENST00000455017 621 ntBASIC5.05□□□□□ -1.6
LDB2O43679 HMGB1P4-201ENST00000455362 567 ntBASIC5.05□□□□□ -1.6
LDB2O43679 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC090114.3-201ENST00000479267 829 ntBASIC5.05□□□□□ -1.6
LDB2O43679 LARP7P4-201ENST00000481075 878 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 AC010374.1-201ENST00000503762 1237 ntBASIC5.05□□□□□ -1.6
LDB2O43679 PRELID3BP5-201ENST00000508612 460 ntBASIC5.05□□□□□ -1.6
LDB2O43679 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.05□□□□□ -1.6
LDB2O43679 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.05□□□□□ -1.6
LDB2O43679 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.05□□□□□ -1.6
LDB2O43679 MTND2P38-201ENST00000522536 667 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC012339.2-201ENST00000523996 453 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC116553.2-201ENST00000564203 463 ntBASIC5.05□□□□□ -1.6
LDB2O43679 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 AL022067.1-201ENST00000602426 454 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC087763.1-201ENST00000603391 286 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC099785.1-201ENST00000605697 437 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL627230.1-201ENST00000613077 211 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AL591926.8-201ENST00000616876 211 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 AC105105.5-201ENST00000622635 1294 ntBASIC5.05□□□□□ -1.6
LDB2O43679 AC092159.4-201ENST00000624944 550 ntBASIC5.05□□□□□ -1.6
LDB2O43679 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.05□□□□□ -1.6
LDB2O43679 LINC01739-205ENST00000641890 573 ntBASIC5.05□□□□□ -1.6
LDB2O43679 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
LDB2O43679 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 NXF4-202ENST00000416098 1465 ntBASIC5.05□□□□□ -1.6
LDB2O43679 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LDB2O43679 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LDB2O43679 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.05□□□□□ -1.6
LDB2O43679 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms