Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC097461.1-201ENST00000568928 2821 ntBASIC5.07□□□□□ -1.6
MSH4O15457 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MSH4O15457 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MSH4O15457 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
MSH4O15457 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MSH4O15457 AL731566.1-201ENST00000620490 1937 ntBASIC5.07□□□□□ -1.6
MSH4O15457 CUL4AP1-201ENST00000514750 1863 ntBASIC5.07□□□□□ -1.6
MSH4O15457 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.07□□□□□ -1.6
MSH4O15457 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MSH4O15457 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.06□□□□□ -1.6
MSH4O15457 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.06□□□□□ -1.6
MSH4O15457 IGKV7-3-201ENST00000357453 298 ntBASIC5.06□□□□□ -1.6
MSH4O15457 MIR141-201ENST00000384975 95 ntBASIC5.06□□□□□ -1.6
MSH4O15457 SNRPFP1-201ENST00000414761 252 ntBASIC5.06□□□□□ -1.6
MSH4O15457 AL355994.1-201ENST00000424379 260 ntBASIC5.06□□□□□ -1.6
MSH4O15457 HMGB1P32-201ENST00000425971 565 ntBASIC5.06□□□□□ -1.6
MSH4O15457 NPM1P26-201ENST00000426339 738 ntBASIC5.06□□□□□ -1.6
MSH4O15457 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.06□□□□□ -1.6
MSH4O15457 AC053481.1-201ENST00000467217 306 ntBASIC5.06□□□□□ -1.6
MSH4O15457 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.06□□□□□ -1.6
MSH4O15457 FTH1P11-201ENST00000517577 551 ntBASIC5.06□□□□□ -1.6
MSH4O15457 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.06□□□□□ -1.6
MSH4O15457 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.06□□□□□ -1.6
MSH4O15457 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.06□□□□□ -1.6
MSH4O15457 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.06□□□□□ -1.6
MSH4O15457 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
MSH4O15457 AC005191.1-201ENST00000603950 358 ntBASIC5.06□□□□□ -1.6
MSH4O15457 AL356218.2-201ENST00000605264 187 ntBASIC5.06□□□□□ -1.6
MSH4O15457 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 MIR6798-201ENST00000612887 67 ntBASIC5.06□□□□□ -1.6
MSH4O15457 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.06□□□□□ -1.6
MSH4O15457 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MSH4O15457 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 AL022322.2-201ENST00000624072 20397 ntBASIC5.06□□□□□ -1.6
MSH4O15457 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MSH4O15457 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.06□□□□□ -1.6
MSH4O15457 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
MSH4O15457 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
MSH4O15457 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
MSH4O15457 AP000542.2-201ENST00000623199 6179 ntBASIC5.05□□□□□ -1.6
MSH4O15457 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
MSH4O15457 FCF1P5-201ENST00000406490 482 ntBASIC5.05□□□□□ -1.6
MSH4O15457 AC016397.1-201ENST00000412463 242 ntBASIC5.05□□□□□ -1.6
MSH4O15457 RPL18P10-201ENST00000425606 538 ntBASIC5.05□□□□□ -1.6
MSH4O15457 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.05□□□□□ -1.6
MSH4O15457 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.05□□□□□ -1.6
MSH4O15457 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.05□□□□□ -1.6
MSH4O15457 RPS27AP16-201ENST00000492222 470 ntBASIC5.05□□□□□ -1.6
MSH4O15457 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.05□□□□□ -1.6
MSH4O15457 SNORD116-30-201ENST00000516468 85 ntBASIC5.05□□□□□ -1.6
MSH4O15457 IGLVIV-65-201ENST00000517313 360 ntBASIC5.05□□□□□ -1.6
MSH4O15457 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.05□□□□□ -1.6
MSH4O15457 AC034205.1-201ENST00000520621 638 ntBASIC5.05□□□□□ -1.6
MSH4O15457 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
MSH4O15457 AC103792.1-201ENST00000603591 919 ntBASIC5.05□□□□□ -1.6
MSH4O15457 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
MSH4O15457 AC006065.6-201ENST00000625201 545 ntBASIC5.05□□□□□ -1.6
MSH4O15457 MTCO1P15-201ENST00000529569 1526 ntBASIC5.05□□□□□ -1.6
MSH4O15457 AC025031.4-201ENST00000621248 3271 ntBASIC5.05□□□□□ -1.6
MSH4O15457 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 AC020633.1-201ENST00000468439 2247 ntBASIC5.05□□□□□ -1.6
MSH4O15457 NXPH1-205ENST00000602349 1953 ntBASIC5.05□□□□□ -1.6
MSH4O15457 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.05□□□□□ -1.6
MSH4O15457 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
MSH4O15457 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
MSH4O15457 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 PROS2P-201ENST00000474651 1951 ntBASIC5.04□□□□□ -1.6
MSH4O15457 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.04□□□□□ -1.6
MSH4O15457 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 RNU1-63P-201ENST00000383902 164 ntBASIC5.04□□□□□ -1.6
MSH4O15457 ARAFP1-201ENST00000422172 605 ntBASIC5.04□□□□□ -1.6
MSH4O15457 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
MSH4O15457 AC016712.1-201ENST00000431088 378 ntBASIC5.04□□□□□ -1.6
MSH4O15457 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.04□□□□□ -1.6
MSH4O15457 Z95152.1-201ENST00000453556 656 ntBASIC5.04□□□□□ -1.6
MSH4O15457 DHFRP3-201ENST00000455595 559 ntBASIC5.04□□□□□ -1.6
MSH4O15457 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MSH4O15457 RN7SL481P-201ENST00000477764 299 ntBASIC5.04□□□□□ -1.6
MSH4O15457 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
MSH4O15457 AP000926.3-201ENST00000497201 299 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.04□□□□□ -1.6
MSH4O15457 OR51K1P-201ENST00000510214 950 ntBASIC5.04□□□□□ -1.6
MSH4O15457 AC092593.2-201ENST00000513866 913 ntBASIC5.04□□□□□ -1.6
MSH4O15457 RFPL4AP3-201ENST00000515267 345 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms