Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC093311.1-201ENST00000506586 2021 ntBASIC4.62□□□□□ -1.67
LSM1O15116 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.61□□□□□ -1.67
LSM1O15116 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.61□□□□□ -1.67
LSM1O15116 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 RPL23P2-201ENST00000320371 421 ntBASIC4.61□□□□□ -1.67
LSM1O15116 RNU6-171P-201ENST00000384354 107 ntBASIC4.61□□□□□ -1.67
LSM1O15116 RNA5SP372-201ENST00000390836 115 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AP000534.2-201ENST00000412729 568 ntBASIC4.61□□□□□ -1.67
LSM1O15116 GJA6P-201ENST00000415117 1042 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 LINC00993-201ENST00000420453 540 ntBASIC4.61□□□□□ -1.67
LSM1O15116 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 RPL7P57-201ENST00000423238 740 ntBASIC4.61□□□□□ -1.67
LSM1O15116 FABP7P1-201ENST00000424004 391 ntBASIC4.61□□□□□ -1.67
LSM1O15116 RPS26P47-201ENST00000427219 348 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.61□□□□□ -1.67
LSM1O15116 RPL7P11-201ENST00000437586 658 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 AC104651.2-201ENST00000447549 528 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
LSM1O15116 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.61□□□□□ -1.67
LSM1O15116 AC106872.4-201ENST00000510050 523 ntBASIC4.61□□□□□ -1.67
LSM1O15116 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 RPL7L1P4-201ENST00000513004 707 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC004980.4-201ENST00000513375 203 ntBASIC4.61□□□□□ -1.67
LSM1O15116 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.61□□□□□ -1.67
LSM1O15116 AC109635.6-201ENST00000525487 1113 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC005000.1-201ENST00000536192 288 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.61□□□□□ -1.67
LSM1O15116 GSTP1P1-201ENST00000548078 319 ntBASIC4.61□□□□□ -1.67
LSM1O15116 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.61□□□□□ -1.67
LSM1O15116 MIR3176-201ENST00000582210 90 ntBASIC4.61□□□□□ -1.67
LSM1O15116 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.61□□□□□ -1.67
LSM1O15116 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.61□□□□□ -1.67
LSM1O15116 AC015722.2-201ENST00000622210 551 ntBASIC4.61□□□□□ -1.67
LSM1O15116 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 AL672167.1-203ENST00000641299 2975 ntBASIC4.61□□□□□ -1.67
LSM1O15116 KARSP3-201ENST00000571212 1504 ntBASIC4.61□□□□□ -1.67
LSM1O15116 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LSM1O15116 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LSM1O15116 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 RNU1-106P-201ENST00000384382 164 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AP002530.1-201ENST00000405705 684 ntBASIC4.6□□□□□ -1.67
LSM1O15116 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
LSM1O15116 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
LSM1O15116 RPL23AP4-201ENST00000427757 463 ntBASIC4.6□□□□□ -1.67
LSM1O15116 MTND2P2-201ENST00000434633 945 ntBASIC4.6□□□□□ -1.67
LSM1O15116 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC016724.1-201ENST00000453215 421 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC069277.2-201ENST00000454211 432 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AP000926.3-201ENST00000497201 299 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.6□□□□□ -1.67
LSM1O15116 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 AC007225.2-201ENST00000562529 256 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.6□□□□□ -1.67
LSM1O15116 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.6□□□□□ -1.67
LSM1O15116 FAM60CP-201ENST00000591086 664 ntBASIC4.6□□□□□ -1.67
LSM1O15116 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 AC006116.3-201ENST00000592968 361 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC011453.2-201ENST00000603737 729 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC012213.4-201ENST00000606457 354 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC026979.4-201ENST00000606555 645 ntBASIC4.6□□□□□ -1.67
LSM1O15116 MIR6768-201ENST00000610734 72 ntBASIC4.6□□□□□ -1.67
LSM1O15116 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 AC234782.5-201ENST00000617723 324 ntBASIC4.6□□□□□ -1.67
LSM1O15116 CR381572.2-201ENST00000624852 397 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC108751.5-201ENST00000492880 1336 ntBASIC4.6□□□□□ -1.67
LSM1O15116 AC010329.2-201ENST00000595195 2737 ntBASIC4.6□□□□□ -1.67
LSM1O15116 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
LSM1O15116 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 AC099654.2-201ENST00000433031 1980 ntBASIC4.6□□□□□ -1.67
LSM1O15116 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.6□□□□□ -1.67
LSM1O15116 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LSM1O15116 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LSM1O15116 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LSM1O15116 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LSM1O15116 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LSM1O15116 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms