Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC073055.1-201ENST00000456901 1621 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 RNU6-543P-201ENST00000362576 108 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 SNORD116-2-201ENST00000384274 95 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 SNORD116-6-201ENST00000384711 96 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RNY3P9-201ENST00000384727 106 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AL645927.1-201ENST00000396783 406 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RPL23AP27-201ENST00000415161 451 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC092170.1-201ENST00000440211 356 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM38O00635 OR51B8P-201ENST00000449892 769 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AL935212.3-201ENST00000450729 284 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RPL23AP12-201ENST00000467573 473 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RN7SL329P-201ENST00000467740 299 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC083923.1-201ENST00000523708 376 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM38O00635 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM38O00635 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 AC012616.1-201ENST00000600294 197 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC093424.1-201ENST00000604999 338 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC024940.4-201ENST00000605507 246 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC023813.4-201ENST00000607580 580 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 RPSAP73-201ENST00000614820 330 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AL118522.2-201ENST00000616045 615 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC026585.1-201ENST00000619582 524 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 LINC01808-202ENST00000641680 1116 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM38O00635 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM38O00635 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM38O00635 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM38O00635 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TRIM38O00635 AC006206.1-201ENST00000544842 3387 ntBASIC5.49□□□□□ -1.53
TRIM38O00635 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
TRIM38O00635 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TRIM38O00635 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM38O00635 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 RNA5SP507-201ENST00000363603 121 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 MIR130A-201ENST00000385274 89 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 SNORD65C-201ENST00000390962 71 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM38O00635 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 AC048351.1-201ENST00000420064 602 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 USP9YP21-201ENST00000420603 432 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AC092648.1-201ENST00000425870 423 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 RRM2P4-201ENST00000441721 562 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AL050341.1-201ENST00000447743 313 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 TRY2P-201ENST00000448860 689 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 NPM1P39-201ENST00000449818 867 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AURKAPS1-201ENST00000451805 1212 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM38O00635 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 DUXAP8-207ENST00000456786 622 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 RPS23P2-201ENST00000463671 415 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 RPS21P4-201ENST00000487122 248 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AC004453.1-201ENST00000487895 408 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 DUTP1-201ENST00000493631 470 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM38O00635 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM38O00635 AL117351.2-201ENST00000513571 157 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 snoU109.6-201ENST00000516831 118 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM38O00635 MORF4L1P3-201ENST00000525966 950 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 OR7E13P-201ENST00000526052 910 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AP003033.1-201ENST00000527244 415 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM38O00635 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM38O00635 AC008751.2-201ENST00000597885 980 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 DUXAP3-201ENST00000603616 594 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 AC000068.2-201ENST00000608816 460 ntBASIC5.48□□□□□ -1.53
TRIM38O00635 DUXAP10-204ENST00000612052 616 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms