Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Z98745.1-201ENST00000402553 494 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 RN7SKP247-201ENST00000411094 308 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC004690.1-201ENST00000418216 328 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPL23AP1-201ENST00000428990 471 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR2B7P-201ENST00000429302 934 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC026979.1-201ENST00000492525 396 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC093840.1-201ENST00000511599 336 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AP005119.2-201ENST00000579735 1105 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC011453.2-201ENST00000603737 729 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL121890.2-201ENST00000617644 465 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 MIR6758-201ENST00000620653 63 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC002044.3-201ENST00000623314 541 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 NR1H5P-201ENST00000452683 1377 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC017104.4-201ENST00000636283 1592 ntBASIC4.61□□□□□ -1.67
TMX2-CTNND1H3BSU7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC125257.1-201ENST00000560400 2930 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL049693.1-201ENST00000402760 611 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00993-201ENST00000420453 540 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL121578.1-201ENST00000428051 892 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC092162.1-201ENST00000432828 434 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 SCAND3P1-201ENST00000439854 1060 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC000111.2-201ENST00000448200 210 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL691482.1-201ENST00000453255 87 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR52A4P-201ENST00000472867 958 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL049830.4-201ENST00000555149 351 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 RN7SL802P-201ENST00000577858 299 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC069061.3-201ENST00000582254 823 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 SS18L2P2-201ENST00000583960 235 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC026979.4-201ENST00000606555 645 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AP000756.2-201ENST00000624168 2567 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC010928.1-201ENST00000592477 1447 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC068446.1-201ENST00000556425 1549 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC022893.2-201ENST00000564832 3296 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 CDY11P-201ENST00000447168 1651 ntBASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMX2-CTNND1H3BSU7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 SNORA71.2-201ENST00000364941 134 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL357515.1-201ENST00000402967 542 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 RNA5SP146-201ENST00000410743 123 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 ELOCP19-201ENST00000411919 318 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 ATG4AP1-201ENST00000416893 538 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AC006065.1-201ENST00000422539 802 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL355994.1-201ENST00000424379 260 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 RPS17P8-201ENST00000434525 335 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 H2AFZP5-201ENST00000446960 382 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 EIF2S2P2-201ENST00000447161 982 ntBASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.59□□□□□ -1.67
TMX2-CTNND1H3BSU7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms