Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MTND4P5-201ENST00000435821 1374 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RPL12P18-201ENST00000437175 325 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 HMGB1P5-202ENST00000451497 985 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC244505.3-201ENST00000454598 187 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 NXT1P1-201ENST00000458481 316 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RPS20P4-201ENST00000461659 355 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 GLUD1P3-202ENST00000508551 200 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RNU6-615P-201ENST00000516065 106 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AP003461.1-201ENST00000528866 78 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 PMS2P3-207ENST00000529061 717 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 EIF4A2P5-201ENST00000529914 499 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 DDX18P5-201ENST00000534547 1306 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC006518.2-201ENST00000542513 940 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 MIR4675-201ENST00000577898 77 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 MIR4311-201ENST00000580794 100 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC012254.4-201ENST00000588843 273 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC119751.7-201ENST00000600494 245 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC021749.1-201ENST00000604322 607 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 DDX43P2-201ENST00000604753 1354 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC018618.2-201ENST00000604770 446 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC013562.2-201ENST00000611632 603 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC126175.1-201ENST00000617041 758 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC074140.1-201ENST00000621617 208 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC007938.2-201ENST00000604666 2634 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 YES1P1-201ENST00000418510 1628 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC008079.2-201ENST00000623543 20396 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RNU6-249P-201ENST00000363016 102 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RNA5SP242-201ENST00000364171 118 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 SNORD116-4-201ENST00000384733 96 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RPL23AP59-201ENST00000399415 461 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RAP1BP1-201ENST00000412709 553 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 OR2AT2P-201ENST00000413438 905 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AL133482.1-201ENST00000415988 498 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 NPM1P18-201ENST00000434232 732 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 SUMO2P3-201ENST00000438311 288 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 ARL4AP3-201ENST00000441452 574 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 MED28P3-201ENST00000444288 531 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 EEF1B2P5-201ENST00000444820 548 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC104978.1-201ENST00000449387 391 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC234781.3-201ENST00000452540 973 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AL133244.1-201ENST00000456007 258 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RN7SL273P-201ENST00000481561 299 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RN7SL214P-201ENST00000487317 265 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 XKRY-201ENST00000510392 1100 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC013701.1-201ENST00000522657 465 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 RFPL1S-203ENST00000539579 330 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AP005403.1-201ENST00000579720 229 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 AC109309.2-201ENST00000612597 332 ntBASIC5.6□□□□□ -1.51
CCDC78A2IDD5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC78A2IDD5 MIR193BHG-214ENST00000641765 509 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms