Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01558Q9Y6Z2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.04
LINC01558Q9Y6Z2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC01558Q9Y6Z2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
LINC01558Q9Y6Z2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
LINC01558Q9Y6Z2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.28□□□□□ -2.05
LINC01558Q9Y6Z2 PWAR6-201ENST00000552334 4618 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 NXPH1-205ENST00000602349 1953 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC138915.3-201ENST00000562908 1389 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 DPM1-203ENST00000371588 1075 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 YWHAZP4-201ENST00000392459 708 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 PLA2G12AP2-201ENST00000424744 264 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC073069.1-201ENST00000428657 441 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 BX323845.1-201ENST00000432417 179 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC000111.2-201ENST00000448200 210 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 HMGB1P7-201ENST00000450921 612 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC073476.1-201ENST00000452854 407 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AP000873.1-201ENST00000463987 400 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 TMED11P-201ENST00000479478 690 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC092451.1-201ENST00000480211 153 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC011037.1-201ENST00000483964 558 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 RPS23P1-201ENST00000491662 432 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 Vault.1-201ENST00000516474 102 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC018620.1-201ENST00000523233 379 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 MRPS16P1-201ENST00000523462 412 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL139174.1-201ENST00000531489 886 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 NEDD8-MDP1-202ENST00000534348 595 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL845331.3-202ENST00000562856 261 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 MIR4425-201ENST00000580572 84 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 BOLA2P1-201ENST00000584794 232 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ADAD1P2-201ENST00000588476 646 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC007687.1-201ENST00000602704 304 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC006946.3-201ENST00000609791 756 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC015819.1-201ENST00000613588 663 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL118522.2-201ENST00000616045 615 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC087821.1-201ENST00000623639 567 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC084879.1-201ENST00000636165 1201 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC008691.1-209ENST00000642094 814 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 ZFRP1-201ENST00000457579 2970 ntBASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01558Q9Y6Z2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 NOL8P1-201ENST00000508336 3529 ntBASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 AL590762.2-201ENST00000395798 571 ntBASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 RNA5SP155-201ENST00000411154 129 ntBASIC2.26□□□□□ -2.05
LINC01558Q9Y6Z2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms